Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00596 ATGGGAAAAGAACTAGTTAGGCAACAATCAACTAGGATTGAAGAACGTAATAGGTTGTGGTTTCCTGAGGATGTTGTTGGTGTTCTGGAGAAAAATAAGGAAAATGATAAAATTGAAGCCATGATGTTGGATATGTTTGAAGATCAAGAAGTTCAATGGAATGAAGAGGTGTTTGGAAAGATGGAAAACCTCAGGATGCTTATAATAAAGAAAGGTTGCCTTTTGGGAAGCCCTAAACATCTCCCTAGTAGTTTCAGAGTGTTAGAATGGTGGGGATATCCTGAATCAAAGGTTTTGCGTCACTTGATCTTCACAAGTTGTAAGAACATAAGACAAATACCCGATGTGTCTAGTTTCCCAAATTTGACAGAATTGTGTGTTGATGATTGCACAAATTTGATTGAGATTCATGATTCTGTTGGATTTCTTGATAAGCTACAAAGGTTCAGTGCTAAAAGATGTACCAAGCTCAATATTGTTCCTGCTCGCATAAAGTTGTCATCTCTAGAATATATATGCCTTCGGGACTGCAACAATCTAAATACTTTTCCAGAAATATTAGGACCAATGGAGAAGTTGAAATTTGTAGACTTGGAAGGCACTGCAATAACAAATCTGCCACTTTCAGTACAAAATCTTAAAGGCATTCAAATGTTAAACCTGAACAGATGCAAAATGCTTGAAAACGATGCGCTCTCCAATATCATTCAAATGTTGCCAATTTTTCATTTTCTGGAAAGATTGGACTTAGAAGACTCAAATTTGACAATCCTTCCTGCATGCATCGAAGAATGTTTCCTGAAATTCATAAACTTGTCAGGTTCCAAGCAGCTTCGAGAAATCAGAGGGCTTCCACCTAGCGCGTATGGTCTCATTGCTAACCACTGCACCTCACTAGACGGTTGTTCACCTTTAAACACGTGGTTACTTTGCCAGGCAATTGGTTCTACATTCAAGGCCTATATTATGCCAGGAAAAAGCATCCCCGAATGGTTTGACCTCTCTTGTAGTGGAAACTGTGTACATTTCTGGTTTCGTAAGGAATTTCCCTCCCTTGTTGTGGGTGCTGTTGTAGGAGTTTGGGATAACATCGGCCTTCCTTTCCATATGAACTTTGATATCCGTCTCAAAATCAATGATATTGAAAGTGGTCCTTGTCCTTGTCTTCGTGTTATAAACATGGTAAATACCGATCATCTATTTATCTCAAATAATTGTGTTTATATAATGAATTCACATAGGGGAAATCTACTTTCAGAGAATGAGTGGAATTATGGGGAGGTTTTATTTGTGAGTAGGGAAGATTCTGGTCCTTCAGGATCAATAAAATGGACTGGAGTTTATGTGAACAGAACAATTACTAGAATGGAGGACATTCAGTTCACAAATCCTTATGCTCCCAAAAATACATGTGATGACTCCAGCTCTAGCAATCGTGATACATTGCTATGTGAGGCACCTGATATCCAACAAGACTTGCTTTTAATGCGTCCATATGAGGAACAACCTTTGAATTATGAGTATAACAAGTCAGATTCAATGGAACCGGCATGGACTATTGGTGGAGCATTCTTGGATCATCAAGCAGAAGTTCCAGGAGAATCATCTCAAGCCCTAGGTTGTGTTGAGATACAAAATATTCAGTTCCAAAGTCTCACTTCATCAAGTGGCCAAATAAGACAAGAACTACACCCAGGAGCTAGTTCTACTATGTTGCTGACAACAATTGATGCATCTCTAAGAAATCAAACTGAACTAACTCAAGATGAATCCCAACAAGATGATGATGTTGAAATGGAAGCGTTTTATGCTTCTCTTGATGCCGAGACCCATGTTGTTCCACGTTCCCATGATAAATTAGCCACCACTGCTCCAAGCGAAGAGGCAAAGAAAGCATTAAAAATAGTCCAAGACTTCATCTAA 1923 0.3879 MGKELVRQQSTRIEERNRLWFPEDVVGVLEKNKENDKIEAMMLDMFEDQEVQWNEEVFGKMENLRMLIIKKGCLLGSPKHLPSSFRVLEWWGYPESKVLRHLIFTSCKNIRQIPDVSSFPNLTELCVDDCTNLIEIHDSVGFLDKLQRFSAKRCTKLNIVPARIKLSSLEYICLRDCNNLNTFPEILGPMEKLKFVDLEGTAITNLPLSVQNLKGIQMLNLNRCKMLENDALSNIIQMLPIFHFLERLDLEDSNLTILPACIEECFLKFINLSGSKQLREIRGLPPSAYGLIANHCTSLDGCSPLNTWLLCQAIGSTFKAYIMPGKSIPEWFDLSCSGNCVHFWFRKEFPSLVVGAVVGVWDNIGLPFHMNFDIRLKINDIESGPCPCLRVINMVNTDHLFISNNCVYIMNSHRGNLLSENEWNYGEVLFVSREDSGPSGSIKWTGVYVNRTITRMEDIQFTNPYAPKNTCDDSSSSNRDTLLCEAPDIQQDLLLMRPYEEQPLNYEYNKSDSMEPAWTIGGAFLDHQAEVPGESSQALGCVEIQNIQFQSLTSSSGQIRQELHPGASSTMLLTTIDASLRNQTELTQDESQQDDDVEMEAFYASLDAETHVVPRSHDKLATTAPSEEAKKALKIVQDFI* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00596 640 Gene3D Ribonuclease Inhibitor 49 164 IPR032675 -
Rops5g00596 640 Gene3D Ribonuclease Inhibitor 165 311 IPR032675 -
Rops5g00596 640 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 79 195 - -
Rops5g00596 640 SUPERFAMILY L domain-like 41 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00596 Rops-Chr5 10119614 10122134 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00596 2 262 WRKY Transcription Factor Family AT4G12020 27.410 3.79e-18 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00596 - - var:108344061 594.734