Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00557 ATGGCTTCCGATAGATTACAATTGCAAAATATGATGAAAAGGGATTCTGAGACCTTTAAGGAATATGCTCAGCGATGGCGAGAGATCGCTGTCCAAGTGGAGCCCCCATTATCTGAAAGGGAGATGGTTCCTATGTTCATTGATACGCTCCAATCACCCTTCTATGATAAGATGATTAGAAGTGTATCATCGAACTTTTCTGACATCGTTATCATAGGGGAAAGGGTTGACAACGGCATGAGGAATGGGAAGATTGTGTCTAGCTCGACCAATACTGGTAATTGGAAGAAAGCCCCAGGAGGAACAGGGAAGAAAAAAGAAGGAGAAACTTATGTTGCGACATCAGATGGAGGAAATTATACCCAACAGACACCCAATTATAGGCCCAACCATTTCCAACAAAATTTCCAAGTCCCATATATGCCTCAACCATATACTGTCATCGCCTCACATGCCCAATATCCCCAACCTTTCAACTCGATGATGCCATATCGTCCACCATCTCCCATTCAACAACAAGCACCCCCTACCATGCCACCTCAAACACTGTCTGAATCGTTGGTTCTATTGATGGAGACGCTTGTTGTTGTGGCACAGCATAGGAACCAATACTACAGCAGGTCTAAGTCACAAGGCCATGCTCGGTTTGGTTCTTCTTCACCTTCCAGAGATTTTAGAGGCATCAATTGTAGAACTTTCCAAACGAGTTCTGGTATTCTACCAACTCCATTGAGATCTTATGGTTCACCTGTAACTAAAGGGTCATCTTCAGTTTCCTCTAAAACACCTTTAACCACTCCAAACTCAAACTCAGATAACAAGACCCGTAGAATAACTGCTCCTTTTAGATCACCTTTTCCAATCAATGTCAAAGCTTGTGAAAAGGAGAGAACTTTCATGGAAAATGTCCCTTTTAGGAGCCTTTCGCTCTACGAACGTTGGGCGGGACCTACCTACTCAAATTCACCACCACCAAGTTCATTGCCTATTCCAAAATTCTCTGTTCGACCAAAGAGGACTGTGCTTTCAGTAGTGGTGGTGCCCTTTGATGGTTGTGGTGGGTCGACAATCTCCAGATATTGGACATTGGATCAAGCTTTGGAGAGGGTAAATGGGTGTATATGTAAGGATGGATTTTATGGGAGCAGGTTTTGCCATGTGACTTGGATGGAAGCTGCCGGGAAGATGGTTGGGAAGCACAATGATGGTAACGGTTTGGAGTGGAATGAAATAGACTTGGTTGACTGTGCTCAAAAGGAGACCTCTGCAGAACCCGTTGATCTGGAGATTACAGGAAGCCTGAAAGATGCTCAAGCTTTTGCTCTCCAGAATGCTCTTTTTGGTCAGGGTCTCATTGCTAATTGGTTTAGGCGGGGACCTCTCATTAAGGCAACATGCCTCAGGACAAAGCCATATACTCTCTTCATATTAATCTTGCTGGCTGTCTTTATACACTTCATGCGAATGTCAAGATCTACTCCACCAGAATATGAGACAAGTGAGGAAATCCGCGCACGTCCTCCACCAATTATTTCTGGCCCGGTTCGTGCGACAGACAGGGGTGGCATCAGGTTCACCATCAATGGTCATTCCTACATCAACTTGGCCCTCATTACTAATGGTGGGGGTGCTGGTGATACCCATTGTGGGCACGTTCTGCATGTGCCATGCAGGAACAAGGAAATTCTCTTCAACACGATGAAGCAGCCAGCCTTTCCAAACGTTTTGCCATGTTCCTCTCATGCATGCGAGAGCCATGGGGTACTGTTGGTGTTACCAGGAAAGCTAACAAAGAGATCTTGGAACATCACTCATGCTCCCACGTCCTCCACATCACCACGACCACCATCAGCACCCATGCACTAG 1866 0.4555 MASDRLQLQNMMKRDSETFKEYAQRWREIAVQVEPPLSEREMVPMFIDTLQSPFYDKMIRSVSSNFSDIVIIGERVDNGMRNGKIVSSSTNTGNWKKAPGGTGKKKEGETYVATSDGGNYTQQTPNYRPNHFQQNFQVPYMPQPYTVIASHAQYPQPFNSMMPYRPPSPIQQQAPPTMPPQTLSESLVLLMETLVVVAQHRNQYYSRSKSQGHARFGSSSPSRDFRGINCRTFQTSSGILPTPLRSYGSPVTKGSSSVSSKTPLTTPNSNSDNKTRRITAPFRSPFPINVKACEKERTFMENVPFRSLSLYERWAGPTYSNSPPPSSLPIPKFSVRPKRTVLSVVVVPFDGCGGSTISRYWTLDQALERVNGCICKDGFYGSRFCHVTWMEAAGKMVGKHNDGNGLEWNEIDLVDCAQKETSAEPVDLEITGSLKDAQAFALQNALFGQGLIANWFRRGPLIKATCLRTKPYTLFILILLAVFIHFMRMSRSTPPEYETSEEIRARPPPIISGPVRATDRGGIRFTINGHSYINLALITNGGGAGDTHCGHVLHVPCRNKEILFNTMKQPAFPNVLPCSSHACESHGVLLVLPGKLTKRSWNITHAPTSSTSPRPPSAPMH* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00557 621 PRINTS Expansin signature 533 554 IPR002963 GO:0009664
Rops5g00557 621 PRINTS Expansin signature 521 533 IPR002963 GO:0009664
Rops5g00557 621 MobiDBLite consensus disorder prediction 86 110 - -
Rops5g00557 621 Pfam Proline-rich nuclear receptor coactivator motif 314 333 - -
Rops5g00557 621 MobiDBLite consensus disorder prediction 206 278 - -
Rops5g00557 621 MobiDBLite consensus disorder prediction 206 279 - -
Rops5g00557 621 PANTHER BNAA03G57290D PROTEIN 191 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00557 Rops-Chr5 9294243 9299556 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00557 441 548 Expansin Gene Family AT3G29030 35.537 6.11e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00557 - - aprc:113850692 197.593