Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00523 ATGGCTCATGTTGAGAAAGGTGGGGTGTCAGTGCTGCCTGAAACACAAGTACAAGTATCTGATGAACTCATGGATTCTAATTTCCGGAGGCCTGTATCAAGGACAAAAAGTGCATCAATTTCTATTCCCATGATCACCATGGAGTCAAATCAGAGAGAAACTAGTCTTGTGGGACACAGTGGTCCACTCTGCAATGAGAGAAAAACTTCCTTTATGAAGATAAGTGGTCCACTATATGCTACCCATGGAACTGGAAATATTTTGCAGCAGAATATAGTTGTGACAGGAAACAAAGTTGTAGAAAGCAAGACAGAAAAAATTTCTACTTCCCATGGCACAGTTGAAAACCATTGGAATAACAACCATGACAGAAAAAATGAACACTTAAGGAAGTCTGGGCAACTGGGAATGTGTGATGAACCTTATTGCGCTACTTGCCCTACTTACTTCAAGACTTCTCTGCAAATAAATTCAAAAGCTTCGACTATTTTTTATCCCAAGGTGGCCTATGTTTCTCCAGAGTCAAGGGTGGTTGGTGCTGGAGATTTAGTTGACGATCCCAAGAAAATTGCTATCCGTTACCTGCAGGGTTATTTTCTTATGGACTTGTTTGTTGTATTTCCTCTTCCTCAGATAATGATATTGTCTATCTTACCGAGGCACTTGGGGTTATCAGGAGCAAAATCTGCTAAGAATCTTCTACGTGCAGTGATCCTTGTGCAGTACATTCCCAGATTATTCAGGATTTTGCCTCTGCTAAATGGCCAATCTCCAACGGGATTCATATTTGAGTCTTCCTGGGCAAATTTCATAATAAATCTTCTCATGTTTATGCTTGCTAGCCACGTTGTTGGCTCTTGCTGGTACCACTTTGGTCTACAGAGGGTTAATCAATGTTTGAGAGATGCCTGCCGTAAGTCTAACATTAATGGATGCATTAAAGTCATTGATTATGGACATGGTCAAGGACATGGAAACAACCAGTCTGCAAGCCAAACATCAGCTACATGGCACAACAATTCAGATGCCATTGCTTGTTTGAATCCCTCTCCTGGTGGTTTTCATTATGGGATCTATGTCAATGCTGTACCACTTACTATAGAAACTAATGTGGTCAATAAATATGTGTATTCTCTATTTTGGGGATTCCAGAAAATCAGTAGTCTGGCTAGTGGTCTAACTCCAAGCTATTTTGAGGGGGAAGTCCTCTTTACGATGGCCATTATAGGATTGGGACTCTTGCTTTTTGCTCTTCTCATTGGAAACATACAGAACTTTCTCCAAGGTCTTGGAAGGAGGAGGCTAGAAATGCTACTTAGAGGCCGTGATGTTGAGCAATGGATGAGGCATCGTCGCTTACCTGAAGAGCTAAGAAGGTGTGAAATGTTCTAA 1392 0.4124 MAHVEKGGVSVLPETQVQVSDELMDSNFRRPVSRTKSASISIPMITMESNQRETSLVGHSGPLCNERKTSFMKISGPLYATHGTGNILQQNIVVTGNKVVESKTEKISTSHGTVENHWNNNHDRKNEHLRKSGQLGMCDEPYCATCPTYFKTSLQINSKASTIFYPKVAYVSPESRVVGAGDLVDDPKKIAIRYLQGYFLMDLFVVFPLPQIMILSILPRHLGLSGAKSAKNLLRAVILVQYIPRLFRILPLLNGQSPTGFIFESSWANFIINLLMFMLASHVVGSCWYHFGLQRVNQCLRDACRKSNINGCIKVIDYGHGQGHGNNQSASQTSATWHNNSDAIACLNPSPGGFHYGIYVNAVPLTIETNVVNKYVYSLFWGFQKISSLASGLTPSYFEGEVLFTMAIIGLGLLLFALLIGNIQNFLQGLGRRRLEMLLRGRDVEQWMRHRRLPEELRRCEMF* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00523 463 Pfam Ion transport protein 182 432 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Rops5g00523 463 SUPERFAMILY Voltage-gated potassium channels 189 432 - -
Rops5g00523 463 Gene3D - 175 429 - -
Rops5g00523 463 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 159 459 - -
Rops5g00523 463 MobiDBLite consensus disorder prediction 106 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00523 Rops-Chr5 8720207 8726406 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00523 167 459 Ion Channels AT3G17700 64.505 2.07e-115 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00523 K05391 - ccaj:109789004 454.521