Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00511 ATGGAAATGAAAGTAGGAGGCGGAGGCTGTGGGAATTTCTTGCAGAAGATGGTGCTGAAGATGGGCTTGACCTTTCAGGGTCAGATAGATTTGCTTTTTTCTGTGGATGATGCACTCAAGGTTATCAAGGAGGGCTCAGCAGGTAGTAGACGGTGGCTTCTTTTGTCCAAGTTGAAGCATGGATTATCCAAGCATAAGGAGGGTCATGGCAAAAAGTTGTTGCCCTGGAACTTGGGCACAGAGGAGAAGGATAAGGTTGAGGTGGAAAATCAGGCAGAGGAGAAGTCTCATGGTGATGACCGTGGTAGGAAGCGGAAAGTGGGTCCTGTAGATCATGATTTGGTTTTGAAGGCAATGTCTCGGGCACTTGAGATGACTGAACTTGCATATTTGGATATGACAGATAAGGTTATTGATACGAACCCAGAGCTTGCTTTAATGGGGTCATGTCTGCTAGTTGTTTTAATGAGGGATGAGGATGTTTATGTGATGAATGTGGGAGATAGCCGGGCCGTAGTGGCACATTATGAGTGCAAAGAGGTTAACTCTAGTAAGGAATCAGGAATCAATGGAGATATTAGCATGGAGAGCATAGTGGAGGAGTCCTTAGCTCCAGGTGAAAGTGCTGTCAAGTTGGGGAATGAGGGTCCTGCTCAAGAAATGAGGTTGGTGGCATTGCAGCTGTCCACGGACCACAGCACGAGCGTTGAAGAGGAAGTCATTAGGATTAAGAATGAACATCCTGATGACAGCCATTGTATTGTAAATGATAGAGTGAAAGGCCGTCTTAAGGTTACCAGAGCGTTTGGGGCTGGATTTTTGAAACAGCCAAAGTGGAATGATGTAGTACTAGAAATGTTTCATAATGAATATATTGGCACTGCTCCATATATATCCTGCTGCCCTTCATTACGTCATCATAGATTATGCCCAATGAGCAATGGGAAGTGGTATTGA 957 0.4493 MEMKVGGGGCGNFLQKMVLKMGLTFQGQIDLLFSVDDALKVIKEGSAGSRRWLLLSKLKHGLSKHKEGHGKKLLPWNLGTEEKDKVEVENQAEEKSHGDDRGRKRKVGPVDHDLVLKAMSRALEMTELAYLDMTDKVIDTNPELALMGSCLLVVLMRDEDVYVMNVGDSRAVVAHYECKEVNSSKESGINGDISMESIVEESLAPGESAVKLGNEGPAQEMRLVALQLSTDHSTSVEEEVIRIKNEHPDDSHCIVNDRVKGRLKVTRAFGAGFLKQPKWNDVVLEMFHNEYIGTAPYISCCPSLRHHRLCPMSNGKWY* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00511 318 MobiDBLite consensus disorder prediction 84 106 - -
Rops5g00511 318 Pfam Protein phosphatase 2C 226 301 IPR001932 -
Rops5g00511 318 Pfam Protein phosphatase 2C 127 174 IPR001932 -
Rops5g00511 318 SUPERFAMILY PP2C-like 111 309 IPR036457 -
Rops5g00511 318 SMART PP2C_4 1 317 IPR001932 -
Rops5g00511 318 CDD PP2Cc 111 311 IPR001932 -
Rops5g00511 318 Gene3D - 51 315 IPR036457 -
Rops5g00511 318 ProSiteProfiles PPM-type phosphatase domain profile. 1 318 IPR001932 -
Rops5g00511 318 PANTHER PROTEIN PHOSPHATASE 2C 89 311 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00511 Rops-Chr5 8625529 8626238 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00511 22 310 PP2C-type Phosphatase Gene Family AT2G35350 60.544 1.58e-114 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00511 - - gmx:100788093 438.343