Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00475 ATGAGGAATAAATTGTCTATGGACATGACATCTCCTGAGAACAAGGGTTTTCAATCAGTGAAAAAATTAGAAGCAACTACAGGAGCAAATTATGTTAAGAATCTTCTACGTGCAGTGATCCTTGTGCAGTACATTCCCAGATTATTCAGGATTCTGCCTCTGCTAAATGGCCAGTCTCCAACTGGATTCATATTTGAGTCTTCCTGGGCAAATTTCATTATAAATCTTCTCATGTTTATGCTTGCTAGCCATGTTGTTGGCTCTTGCTGGTACCTCTTTGGTCTACAGGGTCCCGTAGCTATAAGGATGGCTAAGAGAGCTATTAATGAGGGAGTTGAGACTGATCTAGCTTCATCTTTGGTTTTGGAAAAAGATTGCTATGATCAGGTGTTGAATACTAAAGATCGACTAGAAGGCTTGGCTGCATTTGCTGAAAAGCGAAAACCAAGGAGAGTACGCCAGGCTGAACGGTATAATTGGGTTGCAACAAGCGGGGTGAATGAAGAAATGCTTCTTAGGAATTTGCCAGAAGATCTCCAAATAGACATAAGGCGTCATCTCTTCAAATTTGTTAAGAAAATTCGAATTTTCTCCCTGATGGATGAGTCTATCTTAGATGCCATTTGTGAGAGACTAAGACAAAAGACATACATCAATGGAAGTAGAATTTTGAGTCAAGGTGGTCCAGTAGAGAAGATGGTCTTTATTGTGCGTGGAAAATTGGAAAGCATTGGAGAAGATGGAATTCGAGTTCCCTTATCTGAAGGGGATGCTTGTGGCGAAGAACTTCTAACATGGTATCTTCAACATTCTCCAGTAAGCACAGATTGTAAAAAAGTAAGGCTTCAGGCAAAGAGATTACTTTGCAGCAGGACAGTAAAGTGCTTAACCAATGTGGAGGTTTTTTCACTCAGAGCTACAGACCTTGAAGAAGTCACAACCCTTTTCGTGAGATCCTTGCGGAGTGTACGTGTTCAAGGATCCTTAAGGTATGAATCACCATATTGGAGATCCCTTGCAGCAACCCGAATTCAAGTTACATGGAGATACAAGAAGAAACGTCTAAGTCGTGCTAATACCTCACAATCAGATCAAACATTGAAGTAG 1107 0.4074 MRNKLSMDMTSPENKGFQSVKKLEATTGANYVKNLLRAVILVQYIPRLFRILPLLNGQSPTGFIFESSWANFIINLLMFMLASHVVGSCWYLFGLQGPVAIRMAKRAINEGVETDLASSLVLEKDCYDQVLNTKDRLEGLAAFAEKRKPRRVRQAERYNWVATSGVNEEMLLRNLPEDLQIDIRRHLFKFVKKIRIFSLMDESILDAICERLRQKTYINGSRILSQGGPVEKMVFIVRGKLESIGEDGIRVPLSEGDACGEELLTWYLQHSPVSTDCKKVRLQAKRLLCSRTVKCLTNVEVFSLRATDLEEVTTLFVRSLRSVRVQGSLRYESPYWRSLAATRIQVTWRYKKKRLSRANTSQSDQTLK* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00475 368 Gene3D - 96 148 IPR014748 -
Rops5g00475 368 Gene3D Jelly Rolls 194 318 IPR014710 -
Rops5g00475 368 SMART cnmp_10 196 328 IPR000595 -
Rops5g00475 368 SUPERFAMILY cAMP-binding domain-like 150 313 IPR018490 -
Rops5g00475 368 ProSiteProfiles cAMP/cGMP binding motif profile. 196 272 IPR000595 -
Rops5g00475 368 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 28 96 - -
Rops5g00475 368 SUPERFAMILY ClpP/crotonase 97 150 IPR029045 -
Rops5g00475 368 Gene3D Helix hairpin bin 149 188 - -
Rops5g00475 368 FunFam Probable enoyl-CoA hydratase, mitochondrial 95 153 - -
Rops5g00475 368 CDD CAP_ED 196 312 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00475 Rops-Chr5 8220715 8229118 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00475 25 96 Ion Channels AT3G17700 76.389 1.17e-33 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00475 K05391 - gmx:100795427 350.517