Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00469 ATGCTATCTGGCCATGTTGTTGGTTCTAGCTGGTACCTCTTTGGTCTACAAAGGGTTAATGAATGTTTGCGAGATGCCTGTGGTCGTTCTAATTTACCTGGATGCATGGAGTTGATTGATTTTGATCCTATAATGGGCCAGATATCAACTCTGTGGAGCAACAATACAGGTGCCAATGCTTGTTTGAGTTCCAAGTCTAGTGCTTTTAATTATGGGATCTATGCCAATGTTGTACCACTTACTATAGAAACTAAGCAAATCAGTACTCTGGCTGGTAATCAAAACCCAAGCTATTTTGAGTGGGAAGTCCTTTTTACAATGGGCATCATAGGATTGGGACTCTTACTTTTTGCACTTCTCATTGGAAACATACAGAACTTTCTTCAGGCTCTTGGACGGAGGAGGTTAGAAATGCAACTTAGGGGCCGTGATGTTGAGCAATGGATGAGTCATCGTCACTTACCCGAAGATCTCAGAAGGAGAGTACGACAGGTTGAACGGTATAATTGGGCTGCAACAAGGGGAGTTAATGAGGAAATGCTTTTGGAGAATTTGTCAGAAAATCTCCAGACAGACATAAGACGTCATCTCTTCAAATTTGTTAAGAAAGTTCGAATTTTTGCCCTGATGGATGAGCCTATCTTTGATGCTATTTGTGAGAGACTAAAACACAAGACATACATCAAAGGAAGTAGAATTTTGAGTCAAGGTGGTCTTGTAGAGAAGATGGTCTTTGTTGTGCGTGGAAAATTGGAGAGCACTGGAGAAGATAGAATCAGAGTTCCCTTATCTGAAGGGGATGCTTGTGGCGAAGAACTTCTGAGATGGTATCTTGAAAATTCTTCTGTAAGCACAGATGGTAAGAAAGTAAGGCTTCCAGGACAGAGGTTGCTGAGCAATAGAACAGTAAGGTGCTTAATGTGA 924 0.4145 MLSGHVVGSSWYLFGLQRVNECLRDACGRSNLPGCMELIDFDPIMGQISTLWSNNTGANACLSSKSSAFNYGIYANVVPLTIETKQISTLAGNQNPSYFEWEVLFTMGIIGLGLLLFALLIGNIQNFLQALGRRRLEMQLRGRDVEQWMSHRHLPEDLRRRVRQVERYNWAATRGVNEEMLLENLSENLQTDIRRHLFKFVKKVRIFALMDEPIFDAICERLKHKTYIKGSRILSQGGLVEKMVFVVRGKLESTGEDRIRVPLSEGDACGEELLRWYLENSSVSTDGKKVRLPGQRLLSNRTVRCLM* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00469 307 Gene3D Helix hairpin bin 133 198 - -
Rops5g00469 307 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 306 - -
Rops5g00469 307 ProSiteProfiles cAMP/cGMP binding motif profile. 206 274 IPR000595 -
Rops5g00469 307 Gene3D Jelly Rolls 204 307 IPR014710 -
Rops5g00469 307 CDD CAP_ED 206 274 IPR000595 -
Rops5g00469 307 SUPERFAMILY cAMP-binding domain-like 134 274 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00469 Rops-Chr5 8140167 8144507 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00469 1 284 Ion Channels AT3G17700 64.570 1.32e-114 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00469 K05391 - gsj:114390051 471.47