Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00468 ATGGCTAATTTTGAAAATGATGAGCTGTCATCGCTGTCAGAAACAGATGCACAACCATATGATGAACCCTTTGATCCTAGATTCCAAAGGCTTGTGACCAGGACACAAAGTGCACCAACAATTTCTATACCTATTAGCTCCTTGGAGTCATATGAGACAGAAACTAGTATTGTGGAACATACTGGTCCACTACAGAGTAAGAGAAAAGCACCCTTTATGCAGATGAGTGGTCCACTAAATGCTGTCCCTGGAACTGGAAATCATTTGCAGCAGTGTATTGTTGGAATAGGAAACAAAACAGAGGAGAGAAAGACAGAAAATTTTGCTACTTTCCACAGTACAGATTCCAATTACTGGAATGACAACAATGGTAGAAAAAATGAACACTTGCTGAAGTCTGGGCAACTGGGAATGTGTAATGATCCTTATTGTACTACTTGCCCTACTTACTTCAATGCTTCTCACCAAAGAAATCCAAAACCTTCAACTACATTTGATGCCAAGTTTAGGTTGGCTTATATTCCTCCCGAATCATCAGTGGTTGGGGCTGGAGATTTAGTTGACCATCCAAAGAAAATTGCTCTTCATTACATGAAGAGTTATTTTCTTATTGACTTATTAGTTGTATTTCCTATTCCTTAG 642 0.3894 MANFENDELSSLSETDAQPYDEPFDPRFQRLVTRTQSAPTISIPISSLESYETETSIVEHTGPLQSKRKAPFMQMSGPLNAVPGTGNHLQQCIVGIGNKTEERKTENFATFHSTDSNYWNDNNGRKNEHLLKSGQLGMCNDPYCTTCPTYFNASHQRNPKPSTTFDAKFRLAYIPPESSVVGAGDLVDHPKKIALHYMKSYFLIDLLVVFPIP* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00468 213 MobiDBLite consensus disorder prediction 1 17 - -
Rops5g00468 213 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00468 Rops-Chr5 8126522 8128337 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00468 168 213 Ion Channels AT3G17700 65.217 3.62e-15 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00468 K05391 - gmx:100816338 279.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00468 5 8126522 8128337 Rops5g00468 5 8126522 8128337 ECH