Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00466 ATGGTATTTGTTGTGCGTGGAAAATTGGAGAGCATTGGAGAAGATGGAATCAGAGTTCCCTTATCTGAAGGGGATGCTTGTGGCGAAGAACTTCTGAGATGTAGAGGTCAGCAGAAGTTGCAACATTCAGCAACTTGGCCTCACTACAAAGTAAGAACAACATGGTTAATCAATGTGGTTTCTCTTGCAGATGGTAAGAAAGTAAGGCTTCCAGGACAGAGGTCGCTGAGCAATAGAACAATAAGATGCTTAACAAATGTGGAGGCATTTTCACTCCGTGCTGCAGACCTTGAAGAAGTCACAATTCTTTTCACAAGATTCTTGCGGAGTTCTCATGTTCAAGGAGCTCTAAGCTATGAATCACCCTATTGGAGATCCCTTGCAGCAAACAGAATTCAGAGACTGTACTCTAGTCTCGGGAAAAGTGGCATGGGAATCGATGGTACACCTCTACCTGTGAAGTTTGCTCTAATTGCCAGGGCATTATGA 489 0.4376 MVFVVRGKLESIGEDGIRVPLSEGDACGEELLRCRGQQKLQHSATWPHYKVRTTWLINVVSLADGKKVRLPGQRSLSNRTIRCLTNVEAFSLRAADLEEVTILFTRFLRSSHVQGALSYESPYWRSLAANRIQRLYSSLGKSGMGIDGTPLPVKFALIARAL* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00466 162 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 136 - -
Rops5g00466 162 Gene3D Jelly Rolls 1 106 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00466 Rops-Chr5 8055713 8056953 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00466 1 147 Ion Channels AT3G48010 33.987 2.06e-13 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00466 K05391 - gmx:100785556 168.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00466 5 8055713 8056953 Rops5g00466 5 8055713 8056953 ECH