Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00465 ATGGGAATCATAGGATTGGGACTCTTGCTTTTTGCACTTCTCATTGGGAACATACAAAACTTTCTTCAGGCTCTTGGATGGAGGAGGTTAGAAATGCAACTTAGGGGCCGTGATGTTGAGCAATGGATGAGTCATCATCACTTACCAGAAGATCTCAGAAGGAGAGTACGACAGGCTGAACGGTATAATTGGGCCGCAACAAGGGGAGTTGATGAGGAAATGCTTTTGGAGAATTTGCCAGAAGATCTCCAGACAGACATAAGGCGTCATCTCTTCAAATTTGTTAAGAAAGTTTGA 297 0.4343 MGIIGLGLLLFALLIGNIQNFLQALGWRRLEMQLRGRDVEQWMSHHHLPEDLRRRVRQAERYNWAATRGVDEEMLLENLPEDLQTDIRRHLFKFVKKV* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00465 98 Gene3D Helix hairpin bin 27 92 - -
Rops5g00465 98 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 2 98 - -
Rops5g00465 98 SUPERFAMILY cAMP-binding domain-like 29 93 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00465 Rops-Chr5 8053178 8055601 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00465 17 98 Ion Channels AT3G17700 76.829 4.63e-42 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00465 K05391 - gmx:100794895 170.244