Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00464 ATGACTCCTTTTGAAAAAGATGAGGTGCCAATGCTGTCAGGAGCTCATGCACAACTATCTGATGAACCTGTGAATTCTAATTTCCGGAGGCTTGTATCCAGGACACGAAGTGCATCAATTTCTATTCCTATGGCTTCTCTAGAACCAAATGAGAGAGAACCTAATCTTGTGGGACATACCTGTCCACTTCGTAGTTTCCACAATTCTCTTTATGGAGATGCCAATGGTTTTGGGAGAAAACTTATGTCTTTTTTCTCTTCATGTGTTCCTGGAGTTATGAATCCTCACACTAAAGTTGTACAACAATGGAACAAGTTTTTTGCCATTTTATGCTTGGTGGCAATTTTTGTTGATCCATTATTTTTCTTCTTAATCTATGTGAAGAAGGATTATAAATGTGTTGTTATCAGTTGGAAAGCCACAAAAAATACTCATTTTACTTAG 444 0.3716 MTPFEKDEVPMLSGAHAQLSDEPVNSNFRRLVSRTRSASISIPMASLEPNEREPNLVGHTCPLRSFHNSLYGDANGFGRKLMSFFSSCVPGVMNPHTKVVQQWNKFFAILCLVAIFVDPLFFFLIYVKKDYKCVVISWKATKNTHFT* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00464 147 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 80 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00464 Rops-Chr5 8047654 8049070 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00464 65 142 Ion Channels AT3G17700 56.410 2.28e-27 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00464 K05391 - mtr:120576104 149.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00464 5 8047654 8049070 Rops5g00464 5 8047654 8049070 ECH