Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00461 ATGAGTGAGAGAGAATTTGGAAGCTTCCTGGGCGAAACCGGAAACGAGGGCGTTGGTAGTGGAGAACGTCGGAAGAGTTATCAAGTAAACATGGCTCATTTTGAAAATGATGAGCTGCTCAAGCTGTCAGAAACAAATGCGCAACCATATGATGAATCATTTGATTCTATATTCAAAAGGCCTGTAACCAGATCACAGAGTGCACCAACAATTTCCATACCTATCAGCTTTATGGACTCATATGAGAGAGAAACTAGTCTTGTGGGACATACTGATCAACTAAATGCTACCCCTGTGACTGGAAATCTTTTGCAGCAGCAAGGAAACAATGCAGAGGGGAGAAGGATTGAAAATTTTGCTACTTTCTGCAGCACAGATTCAAGTCACTGGAATGACAAGTGTGATAGAAAAAATGAAAACTTACTGAGGTCTGGGCAACTGGGAAGGTGTGTTGACCCTTATGGTACTACTTGCCCTATTCACTTCAATGCTTCTCAGCAAAAAAATCCAAAACCTTCGACTATATTCGATCCCAAGTTAAAGAAGTCTGAAGATTCAGAGGAGTTACCTAAAGCTCCTTTCCACAGGGCTCTTTATGGGGTTGCCAAGGATTTTGTGAGAAAACTTTTTTCCTTCTGCTCTTCATTTGTAACTGGAGTTAAGAACCCTCGTGACAAAGCCGTTCTATACTTGAACACGATTTTTGCTGTTTTTGGCTTTATTTCTATTTTTGTGGATCCATTATTTTCCTTCTTAATCCATGTGCAACAGGATTATAAATGTATTGCAATCAACTTGAATTTGACAACAGCACTTGTTTTACTTAGAAGCATAAGTGATGTTGTATATTTCATGAAAATTGTTCTTCAGTTTAGGTTGGCTTATGTTTCTCCTGAGTCAACGGTGGTTGGTGCTGGGGATTTAATAGACCAGTCAATGAAAATTGCTCTTCATTACCTGAAGGGTTATTTCTTTATTGACTTATTTGTTGCACTTCCTCTTCCTCAGATAATGATATTATTAGTCTGGCCAAATTCCTTGAGAGGAGCAAATTATGCTAAGGGTGTTCTGCGTGCAGCAATCTTAGTGCAATATATTCTCAAGTTATTCAGGATTCTGCCTCTGTTAACTGGCCAATCTCCAATAGGGTTCATATCTGAGTCAGCATGGGCTCATTTCATTATAAATCTTCTCATTTTTATGCTTGCTAGCCATGTTGTTGGTTCTTGTTGGTACCTCTTTGGTCTACAGAGGATTAATCTATGTTTGAGAGAAGCCTGCCAGAAGTCTAATATTACTGGATGCATGAATTTCATTGATTGTGGACTTGGTCGTAATGGAAACCAACTTGACCTAACATCAAATAAATGGAACAACAATACAGATGCCATTAATTGTTTGTATCCCCCTTCTGAAGGACTCTTGCTTTTTGCAATTCTCATTGAAGATATACAGAATTTTCTACAGGCTCTTGGACGGAGGAGTCTAGAAATGCAACTTAGAAGACGTGATGTTGAGCAATGGATGAGCCATCGACGCTTACCAAAAGGTTTAAGAAGGAGTGTAAGACAAGTTGAACAGTATAATTGGGTAGCAACAAGGGGTGTGAATGAAGAAATGCTTATGGAGAATCTACCAGAAGATTTGCAGAGAGACATAAGACGTCATCTCTTCAAATTTGTTAAGAAAATTCGATTTTTTTCCCAGATGGATGAGCCTATCTTAGACGCCATATGTGAGAGACTAAGACAAAAGACATACATTAAAGGAAGTAGAATCTTGAGTCAGGGAGGTTTGGTAGAGAAGATGGTATTTGTGGTGCGAGGCAAATTAGAGAGTATTGGAGAAGATGGAGCTAGAGCTCTATTATCTAAAGGGGACGCTTGTGGTGAAGAACTTCTCACATGGCATCGTGACCATTCTTTCGTCAGCAAAGATGGTAAAAACTTGAGGCTTCCAGGGCAGAGATTGGTTAGCACCAGAACTGTAAAGTGCTTGACAAATGTAGAGTTATTTTCACTCTCTGCTGCAGCCCTTGAAGAAGTGACAATGTTTTTCACAAGTTTCTTAAGGAGTTCACGTGTTCAAGGAGCCTTAAGGTCATTCCCTTGTCTTGTATCTATCAAGATTTATTGTTCAGCATAA 2145 0.3944 MSEREFGSFLGETGNEGVGSGERRKSYQVNMAHFENDELLKLSETNAQPYDESFDSIFKRPVTRSQSAPTISIPISFMDSYERETSLVGHTDQLNATPVTGNLLQQQGNNAEGRRIENFATFCSTDSSHWNDKCDRKNENLLRSGQLGRCVDPYGTTCPIHFNASQQKNPKPSTIFDPKLKKSEDSEELPKAPFHRALYGVAKDFVRKLFSFCSSFVTGVKNPRDKAVLYLNTIFAVFGFISIFVDPLFSFLIHVQQDYKCIAINLNLTTALVLLRSISDVVYFMKIVLQFRLAYVSPESTVVGAGDLIDQSMKIALHYLKGYFFIDLFVALPLPQIMILLVWPNSLRGANYAKGVLRAAILVQYILKLFRILPLLTGQSPIGFISESAWAHFIINLLIFMLASHVVGSCWYLFGLQRINLCLREACQKSNITGCMNFIDCGLGRNGNQLDLTSNKWNNNTDAINCLYPPSEGLLLFAILIEDIQNFLQALGRRSLEMQLRRRDVEQWMSHRRLPKGLRRSVRQVEQYNWVATRGVNEEMLMENLPEDLQRDIRRHLFKFVKKIRFFSQMDEPILDAICERLRQKTYIKGSRILSQGGLVEKMVFVVRGKLESIGEDGARALLSKGDACGEELLTWHRDHSFVSKDGKNLRLPGQRLVSTRTVKCLTNVELFSLSAAALEEVTMFFTSFLRSSRVQGALRSFPCLVSIKIYCSA* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00461 714 SUPERFAMILY Voltage-gated potassium channels 223 419 - -
Rops5g00461 714 SUPERFAMILY cAMP-binding domain-like 494 689 IPR018490 -
Rops5g00461 714 ProSiteProfiles cAMP/cGMP binding motif profile. 566 634 IPR000595 -
Rops5g00461 714 MobiDBLite consensus disorder prediction 1 23 - -
Rops5g00461 714 CDD CAP_ED 566 691 IPR000595 -
Rops5g00461 714 Pfam Ion transport protein 233 446 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Rops5g00461 714 Gene3D Helix hairpin bin 494 558 - -
Rops5g00461 714 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 447 696 - -
Rops5g00461 714 SMART cnmp_10 566 701 IPR000595 -
Rops5g00461 714 Gene3D Jelly Rolls 564 687 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00461 Rops-Chr5 7922648 7945107 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00461 32 644 Ion Channels AT3G17700 43.920 5.94e-178 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00461 K05391 - gmx:100795427 843.958