Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00459 ATGCTTCTGGAGAATTTACCAGAAGACCTCCAGAGGGACATCAGACGTCATCTCTTTAACTTTGTTAAGAAAGTTCGAATTTTTGCCTTGTTGGATGAGCATATCTTGGATGCCATCTGTGAGAGACTAAGACAAAAAACATATATCAAAGGAAGCAAAATTTTGTATGAAGGTGGTCTAGTAGATAAGATGGTTTTTATTGTGCGTGGAAAATTGGAGAGCTTCGGTGAAGATGGAATTAGAGTTCCCCTATCCGAGGGAAGTGTTTGTGGTGAAGAGCTTCTGACATGGTGTCTTGCACATCCTTCAGGAAACAAAGAGGATAGTGTTGTGACATATGCTGCTGAACTTGCAAAAGTTAACAACATCAACTTGGTTTCATTTGAAGGTGGTGGAAAAACAAGGGTTCCAAGACAAAGGTTGGTTAGCAACAGGACAGTGTTGTGCTTAACGAATGTGGAGGCATTTTCCCTTAGAGCAGCAGACCTTGAAGAAGTTACCAGCCTTTTTGCAAGATTCTTAAGGAGTCCCGGTGTTCAAGGAGCCATAAGGTATGAATCACCATACTGGAGAAGCTTTGCAGCAACAAGCATCCAAGTTGCATGGAGATATAGAAAGAAATGTCTTAGTCGTGCTAACACTCCACAATCAAATGAAACTTCAAGGTTTTAG 672 0.4107 MLLENLPEDLQRDIRRHLFNFVKKVRIFALLDEHILDAICERLRQKTYIKGSKILYEGGLVDKMVFIVRGKLESFGEDGIRVPLSEGSVCGEELLTWCLAHPSGNKEDSVVTYAAELAKVNNINLVSFEGGGKTRVPRQRLVSNRTVLCLTNVEAFSLRAADLEEVTSLFARFLRSPGVQGAIRYESPYWRSFAATSIQVAWRYRKKCLSRANTPQSNETSRF* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00459 223 SMART cnmp_10 27 147 IPR000595 -
Rops5g00459 223 Gene3D Jelly Rolls 1 177 IPR014710 -
Rops5g00459 223 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 2 212 - -
Rops5g00459 223 ProSiteProfiles cAMP/cGMP binding motif profile. 27 129 IPR000595 -
Rops5g00459 223 SUPERFAMILY cAMP-binding domain-like 16 104 IPR018490 -
Rops5g00459 223 CDD CAP_ED 27 95 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00459 Rops-Chr5 7868109 7871497 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00459 1 105 Ion Channels AT3G17700 70.476 9.53e-46 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00459 K05391 - gmx:100795955 330.487