Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00457 ATGGCTAATTCTGAAAATGATGAGCAGCCGATGCTGTCAGAAACAGATGCAAAACCTTATGATGAACCCTATGATTCTAAATTCCGAAGGCTTGTAACCAGGACACAAAGTGCGTCAACAATCTCTATAGCTATGAGCTCCATGGACTCATATGAGAGAGAAAGTAGTCTTGTGGGACATACTGGTCCACTTCAGAGTAAGAGAAAAACACCCTTTAAGCAGATGAGTGGTCCACTAAATACTACCCCTGGAACTGGGAATCTTTTGCAGCGGCATGTTGTTGGAATAGGAAACAAAGCAGAGGAGGGAAAGACAGAAAATTTTGCTACTTTCAGCAGCACAGGTTCAAATTACTGGAATGACAACAACTATGACAGAAAAAATGAACACTTACTGAGGTCTGGGCAACTGGGAATGTGTAATGATCCTTATTGCACTACTTGCCCTACATACTTCAATGCTTCTCAGCAAAGAAGTCGAAAACCTTCGACTATATTTGATCCCAAGTTCCACAATGCTCTTTATGGGGATGCCAAGGGTTTTGCAAGAAAACTTTTTTCTTTCTGCTCTTCATATGTTCCTGGAGTTATGAACCCTCATGCTAAAGTCGTTCAACAATGGAACCAGTTTTTTGCCATTTTTTGCTTGATTGCTATTTTTGTGGATCCATTATTTTTCTTCTTACTCTATGTGCAGCAGGATTATAAATGTATTGTAATCAACTGGAATATGACAACGGCACTTGTTTTACTTAGAAGCATAAATGATATTGTCTATTTCCTTAACATTCTTCTACAGTTTAGGTTGGCTTATGTTTCTCCTGAATCAACAGTGGTTGGTGCTGGAGATTTAGTTGACCAGCCAAAGAAAATTGCTCTTCATTACTTGAAGGGTTATTTCTTTATTGACTTATTTGTGGTATTTCCTCTTCCTCAGATAATGATATTATTTGTCCTGCCAAATTCCTTGGGAGGAGCAAACCATGCTAAGAATGTTCTGCGGGCAGTAATCTTAGTGCAGTATATTCCCAAGTTATTCAGGATTCTACCACTGCTGATTGGCCAATCTCCAACGGGATTCATATTTGAGTCAGCCCGGGCAAATTTTATTATAAATCTTCTCATTTTTATGCTTGCTAGCCATGTTGTTGGTTCTTGCTGGTACCTCTTTGGTCTACAGAGGGTTAATCTATGTTTGCGAAAAGCCTGCTTGAACTCTAATATTACTGGATGCATGAAATTCATTGATTGTGGACATGGCCGTAATGGAAACAATCAGCCTGACCTAACATCGAACCAATGGAACAACAATACAGATGCCATTAATTGTTTGTTTCCCCCTTCTGATGGTGGTTTTGATTATGGGATCTATAAGTATGCTGTACCACTAACTATGGAAACTAACGTGATCAACAAATATGTGTATTCTCTTTTTTGGGGATTCCAGCAAATCAGTACTCTAGCTGGTAATCAACAGCCTAGCTATTTTGTGTGGGAAGTCCTTTTTACTATGTCCATCATTGGATCGGGACTCTTGCTTTTTGCAATTCTCATTGGAAATATACAGAATTTTCTACAGGCTCTTGGACGGAGGAAGCTAGAAATGCAACTTAGAGGCCGTGATGTTGAGCAATGGATGAGCCATCGACGCTTACCAGAAGATCTAAGAAGGAGAGTAAGACAGGCTGAACGGTATAATTGGTCTGCAACAAGGGGTGTGAATGAAGAAGTGCTTATGGAGGATCTGCCAGAAGATCTGCAGAGAGACATAAGACGTCATCTCTTCAAATTTGTTAAGAAAATTCGAATTTTTTCCCTGATGGATGAGCCTATCTTAGACGCCATATGTGAGAGACTAAGACAAAAGACATACATCAAAGGAAGTAGAATTTTGAGTCAGGGTGGTCTGGTAGAGAAGATGGTATTCGTGGTGCGTGGCAAATTGGAGAGCATTGGAGATGATGGAACTAGAATTCCCTTATCTGAAGGGGATGCTTGTGGTGAAGAACTTCTAACATGGTATCTTGAACATTCTTCTGTCAGTACAGATGGTAGAAAAGTAAGGCTTCCAGGACAGAGGTTGGTTAGCAACAGGACAGTAAGGTGCTTAACAAATGTGGAGGTATTTTCACTCTCTGCTGCAGACCTTGAAGAAGTCACAATCCTTTTCACAAGATTCTTGCGGAGTCCACGTGTTCAAGGAGCCCTAAGGTATGAATCACCTTATTGGAGATCCCTTGCTGCAAACCGTATTCAAGTTGCATGGAGATACAGAAAGAAACGTATAAGTCGTGTTAATTCCTCACTATCAGACTAA 2316 0.4028 MANSENDEQPMLSETDAKPYDEPYDSKFRRLVTRTQSASTISIAMSSMDSYERESSLVGHTGPLQSKRKTPFKQMSGPLNTTPGTGNLLQRHVVGIGNKAEEGKTENFATFSSTGSNYWNDNNYDRKNEHLLRSGQLGMCNDPYCTTCPTYFNASQQRSRKPSTIFDPKFHNALYGDAKGFARKLFSFCSSYVPGVMNPHAKVVQQWNQFFAIFCLIAIFVDPLFFFLLYVQQDYKCIVINWNMTTALVLLRSINDIVYFLNILLQFRLAYVSPESTVVGAGDLVDQPKKIALHYLKGYFFIDLFVVFPLPQIMILFVLPNSLGGANHAKNVLRAVILVQYIPKLFRILPLLIGQSPTGFIFESARANFIINLLIFMLASHVVGSCWYLFGLQRVNLCLRKACLNSNITGCMKFIDCGHGRNGNNQPDLTSNQWNNNTDAINCLFPPSDGGFDYGIYKYAVPLTMETNVINKYVYSLFWGFQQISTLAGNQQPSYFVWEVLFTMSIIGSGLLLFAILIGNIQNFLQALGRRKLEMQLRGRDVEQWMSHRRLPEDLRRRVRQAERYNWSATRGVNEEVLMEDLPEDLQRDIRRHLFKFVKKIRIFSLMDEPILDAICERLRQKTYIKGSRILSQGGLVEKMVFVVRGKLESIGDDGTRIPLSEGDACGEELLTWYLEHSSVSTDGRKVRLPGQRLVSNRTVRCLTNVEVFSLSAADLEEVTILFTRFLRSPRVQGALRYESPYWRSLAANRIQVAWRYRKKRISRVNSSLSD* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00457 771 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 140 763 - -
Rops5g00457 771 Pfam Ion transport protein 208 530 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Rops5g00457 771 MobiDBLite consensus disorder prediction 1 24 - -
Rops5g00457 771 SUPERFAMILY Voltage-gated potassium channels 202 531 - -
Rops5g00457 771 CDD CAP_ED 603 719 IPR000595 -
Rops5g00457 771 Gene3D Jelly Rolls 601 725 IPR014710 -
Rops5g00457 771 ProSiteProfiles cAMP/cGMP binding motif profile. 603 671 IPR000595 -
Rops5g00457 771 Gene3D - 206 528 - -
Rops5g00457 771 SUPERFAMILY cAMP-binding domain-like 531 721 IPR018490 -
Rops5g00457 771 MobiDBLite consensus disorder prediction 58 88 - -
Rops5g00457 771 SMART cnmp_10 603 738 IPR000595 -
Rops5g00457 771 Gene3D Helix hairpin bin 530 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00457 Rops-Chr5 7812465 7825654 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00457 2 681 Ion Channels AT3G17700 59.738 0.0 808
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00457 K05391 - gmx:100795427 1319.29