Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00431 ATGGAAGACACAAATTCAGTTGAAGTGATTTTGGACTTTCTGAAGAGGAACCGGTTCACAAGAGCCGAGGCAGCTCTGCGTAGTGAGCTCAATAACCGTTCTGATGTCAATGGTTTCCTTCAGAAGCTTACATTGGACGAGAAGGCCTTGTGTGATATGTCACAGAATGATAAGGGGAAGCTCATGGTAGAAAATCAAGGGTCGAATTCTCGTGATAGTGTTGAAGTTTCTAAAGAATTGATTGTGAAGGAAATAGAGTGTGGGACTGGTAGAAATGCTGCTGAAAGCAAATGGAAAACTGCTGCTCCCATTGAGGAAAGGAACAAAACTAATGAATTGGTGGGGACGAGTGACAAAAACCTCACTTTCTTGAAGAGTTCGGAGGACGGTGTGTTTGATTTACAATCATGGAAGATTAATTCCAGCAATGGTCCTGTGGAGCCTTACCAAAATGATGGTGGAAGCAGGGCTAATAATACTTCAAAGGCCCCGATATCTCAGCAATCAAAAAACCAAACGGGTGAAGCCCCTAATGCTGCCAACAATAATGCAAAACATGGGGAGGAAAATAATGTGCCTGCCGAAAAAAAACCCTTGTGGCTTGGAAGTAGTGGTAAAGCCTCTATGGAACCAAAGAGTGACCTTATGCAAAGCAAAGAATTCAGGGAACTTGATCGGCCGCTTAAATTTAATAGTTCATCTCTTAAAGAGAACTTGGCAGATAATGTCTTGTCAAGAATTGATGAGAATGTGAATTCGTCTTCAGAACTATGGAAAGATTGTTCAGTCAAGACCGTTTTCCCTTTCTCAAAGGGGGATATGTCTACGAGCTATAATGGTTCAACTTATTCTGAGAAAAAAGAGGAAAAGAGAAAGGCAGAAATCAGCGATGTTAGGGCATATATAAAAGAGCAGGTGGATGAAGTGGGGAGAGCTTTTTACTTAGGAAAGTTGCAAGGCAGTTCTGAACAGAAGACTGTTGGTGGCTTAATTTTTCCTCTTGCACCGGATAAGCAGAAGGAAGAGTTTCCTAGGCTTCCTCCAGTAAAAATTAAGTCAGAAGATAAGCCCTTGACAATTACTTGGGGGGAGAAGTTTGAATCCGAAGGAATGGCTGCGAAGCTTGGTGGTGCTGACAGCACTTTACTTATTGGATCATATCTGGATGTCCCTATTGGACAAGAAATCAAAACTGCAGGTATGAGGAAGGCTACAGGGGGTAATTGGCTGTCTGTAAGTCAAGGGATTGCTGAGGATACATCTGACCTTGTATCGGGTTTTGCAACAGTTGGTGATGGGTTGAGTGAATCTGTTGATTATCCAAATGAATATTGGGATTCTGATGAATATGACGACGACGATGATGTTGGGTACATGAGACAACCTATTGAGGATGAGGCCTGGTTTTTGGCGCATGAAATTGATTACCCTAGTGACAATGAAAAGGGGACCGGGCATGGAAGTGTCCCAGATCCTCAGGAAAGAGGTCCAGCCAAAGACGAGGATGATGATCAATCTTTTGCTGAGGAGGATTCTTACTTTTCTGGTGAGCAATATCTTCAAGAAAAGAATGTTGAGCCAGTCACAGCTTCAGATGATCCTATCGGTCTAACGGTTACTGAAGTGTATGGAAGGACTAATGGTAATGATTTAATGGCTCAATATGATGGACAACTGATGGATGTTGAAGAACTGAATCTGATGCATGCAGAACCTGTCTGGCAGGGTTTTGTCACTCAGACAAATGATCTAATCGTGCTGGGAGATGGGAAGGTTCAGAATCATAATGGCAGACCTCGAATTGAGGAAATGGAAGATGATCAGCACGGTTCAGTTAGGTCAATTGGGGTAGGTATCAACAGTGATGCTGCTGATATGGGCAGTGAAGTGCATGGAAGTTTGATTGGTGGTAGTAGTGAAGGGGATTTAGAATATTTCCATGATCATGATAGTGTACGTGGGGGCTCCAAACACTCTCATCATGATTTGGATAAGAATTCTATTAACAAATCATTCAAAGATAAGAAGAAAAGTAACAAGAGTGAGTCAACTAAGTATGTCATTGGGGGTGATAGAGATACATGCTTGCAAATAAAAACACATACCGAAGGAAACTTCTCATTCCCCCAATCTTTTAAAGATGGCCAGATGATTCAGGCTGGCCCCAGTAAGTCCCTATGGTCTAATAATTGTAATGCAGATGAAACAGGTGACTGTATTAATGCTTTTGTGGGATCTGATGACATGCTTTCTTCTTGGAAGCGGAAGAGTAATGATTCTTCACCTGTTAAAAGTTCTAGAGATGAGAATAATGCTAATATGGTAAGATCCACAAACTCTTCCCCAACTACAGTCTCAAATTATGGGTATGATGATAAAGAGCATGTCAAGCTAGAAAAGGATGAAGAGGTTAGCATTGCAAAGGAAGATGATCTAGGTGCATCACTAGAGGATGATGAGGTTGCTGCTGTGCAAGAACAGGTAAGGCAAATAAAGGCTCAGGAGGAGGAATTTGAAACCTTCAATCTAATGATTGTGCACAGGAAAAACAGAACTGGCTTTGAGGAGGACAAGAATTTCCATGTTGTTTTAAATTCTGTAATAGCTGGGCGCTATCATGTCACTGAGTATCTGGGATCTGCTGCATTTAGCAAAGCTATACAAGCTCATGACCTGCACACAGGCATGGATGTTTGTGTTAAAATTATAAAGAACAACAAGGACTTCTTTGACCAAAGCCTTGATGAGATCAAGCTTCTCAAGTATGTCAATAAGCATGATCCTGGAGACAAGTATCACATTCTGCGATTATATGATTATTTCTATTATAGAGAACATTTGTTAATAGTATGCGAACTACTTAAAGCCAACTTATATGAGTTTCATAAATTTAACAGAGAATCAGGGGGGGAGGTGTATTTCACAATGCCAAGATTGCAGTCAATTACCATTCAATGTTTGGAAGCACTTCAGTTTTTACATAGCCTTGGACTAATACATTGTGACTTGAAGCCAGAGAATATTTTGGTTAAAAGCTATAGCAGATGTGAGGTGAAGGTCATTGATCTTGGAAGTAGTTGTTTTGAGACGGATCACCTTTGCTCGTATGTTCAGTCCAGGTCCTATCGTGCCCCTGAGGTTATTTTGGGGCTTTCATATGACAAGAAGATCGATGTCTGGTCCCTTGGATGCATCTTGGCAGAACTTTGTACTGGCAATGTCCTCTTCCAAAATGATTCACCTGCAACATTACTTGCTCGGGTGATTGGGATCATTGGTTCAATTGATCAAAGTATGCTTGCAAAAGGACGGGATACATATAAGTACTTCACAAAAAATCATATGCTTTATGAACGGAATCAGGAAAGCAACAGGTTAGAATACCTGATTCCAAAAAAGACATCCTTGAGGCATAGATTACCAATGGGGGACCAAGGCTTCATTGACTTTGTTGCTCATTTGCTTGAGGTTAACCCGAAGAAGCGGCCTTCTGCTTCCAAGGCCCTGAAGCACCCATGGTTATCATACCCTTATGAACCAATATCTTCATGA 3552 0.4133 MEDTNSVEVILDFLKRNRFTRAEAALRSELNNRSDVNGFLQKLTLDEKALCDMSQNDKGKLMVENQGSNSRDSVEVSKELIVKEIECGTGRNAAESKWKTAAPIEERNKTNELVGTSDKNLTFLKSSEDGVFDLQSWKINSSNGPVEPYQNDGGSRANNTSKAPISQQSKNQTGEAPNAANNNAKHGEENNVPAEKKPLWLGSSGKASMEPKSDLMQSKEFRELDRPLKFNSSSLKENLADNVLSRIDENVNSSSELWKDCSVKTVFPFSKGDMSTSYNGSTYSEKKEEKRKAEISDVRAYIKEQVDEVGRAFYLGKLQGSSEQKTVGGLIFPLAPDKQKEEFPRLPPVKIKSEDKPLTITWGEKFESEGMAAKLGGADSTLLIGSYLDVPIGQEIKTAGMRKATGGNWLSVSQGIAEDTSDLVSGFATVGDGLSESVDYPNEYWDSDEYDDDDDVGYMRQPIEDEAWFLAHEIDYPSDNEKGTGHGSVPDPQERGPAKDEDDDQSFAEEDSYFSGEQYLQEKNVEPVTASDDPIGLTVTEVYGRTNGNDLMAQYDGQLMDVEELNLMHAEPVWQGFVTQTNDLIVLGDGKVQNHNGRPRIEEMEDDQHGSVRSIGVGINSDAADMGSEVHGSLIGGSSEGDLEYFHDHDSVRGGSKHSHHDLDKNSINKSFKDKKKSNKSESTKYVIGGDRDTCLQIKTHTEGNFSFPQSFKDGQMIQAGPSKSLWSNNCNADETGDCINAFVGSDDMLSSWKRKSNDSSPVKSSRDENNANMVRSTNSSPTTVSNYGYDDKEHVKLEKDEEVSIAKEDDLGASLEDDEVAAVQEQVRQIKAQEEEFETFNLMIVHRKNRTGFEEDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHILRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDVWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGSIDQSMLAKGRDTYKYFTKNHMLYERNQESNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEVNPKKRPSASKALKHPWLSYPYEPISS* 1184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00431 1183 MobiDBLite consensus disorder prediction 645 684 - -
Rops5g00431 1183 MobiDBLite consensus disorder prediction 139 188 - -
Rops5g00431 1183 Pfam Protein kinase domain 872 1174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00431 1183 Gene3D Transferase(Phosphotransferase) domain 1 926 1174 - -
Rops5g00431 1183 ProSiteProfiles Protein kinase domain profile. 872 1174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00431 1183 MobiDBLite consensus disorder prediction 139 213 - -
Rops5g00431 1183 SUPERFAMILY Protein kinase-like (PK-like) 861 1176 IPR011009 -
Rops5g00431 1183 SMART serkin_6 872 1174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00431 1183 MobiDBLite consensus disorder prediction 476 509 - -
Rops5g00431 1183 MobiDBLite consensus disorder prediction 645 682 - -
Rops5g00431 1183 FunFam Putative serine/threonine-protein kinase dyrk2 866 953 - -
Rops5g00431 1183 MobiDBLite consensus disorder prediction 755 788 - -
Rops5g00431 1183 PANTHER DUAL SPECIFICITY PROTEIN KINASE 408 1174 - -
Rops5g00431 1183 CDD PKc_DYRK_like 872 1174 - -
Rops5g00431 1183 Gene3D Phosphorylase Kinase; domain 1 866 953 - -
Rops5g00431 1183 ProSitePatterns Serine/Threonine protein kinases active-site signature. 998 1010 IPR008271 GO:0004672|GO:0006468
Rops5g00431 1183 MobiDBLite consensus disorder prediction 753 791 - -
Rops5g00431 1183 FunFam Serine/threonine-protein kinase ppk15 951 1175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00431 Rops-Chr5 7431359 7441412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00431 871 1169 MAP Kinase Gene Family AT5G19010 30.721 9.25e-30 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Rops5g00431 Pkinase 1.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00431 - - mtr:25496682 2016.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00011 2 227784 240493 Rops5g00431 5 7431359 7441412 PCT