Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00396 ATGGCTCTGGTCCACCACCGTCACCGCCGTCACCCCAACCTCCGCCTACCGGAACTTACCGAGCGCCGCCCACGTTTCCCTCTTCCCCTCCCACCGAACACCTTCAAACCCACCACTGCCGGCGCCGGGGACACCATATCCTCCGGAGACATAGAAAAGCTCGCCGTCCTTGGCCACGGCAACGGTGGTACCGTCTACAAGGTCCGCCACAAGGTAACCTCCGCCGTGCACGCGCTCAAAGTTGTCAACTTTAACTCCGACACCACCACGTGCCGCCGCGCGTTCGGCGAAATCAACATCCTCCGACGCGCCGCCGATTGCCCCCACATCGTGAAATACCACGGCTCCTTCGAGAAACCCTCCGGCGACGTGGGGATCCTCATGGAGTACATGGATTCCGGCACCCTTGAAACCGCCCTGAAGAAAAACGGCACCTTTTCGGAACAACGACTCTCCACGGTGGCGCGTGACGTTCTCCAGGGCCTCGCGTACCTCCACGCGCGTAACATTGCACACCGTGACATAAAGCCCTCAAACCTCCTCGTAAACTCCGAAAACGAGGTTAAGATCGCCGACTTTGGAGTTAGCAAACTCATGTGTCGCACGCTTGAAGCGTGTAAGTCTTACGTTGGCACGTGCGCGTACATGAGTCCAGAACGGTTCGACCCGGAAGCTTATGGAGGGAACTATAACGGTTTTGCGGCTGATATATGGAGTTTGGGTTTGACACTTTTTGAACTCTATGTGGGTCACTTCCCATTTCTTCAATCGGGTCAGAGACCCGATTGGGCAACCCTTATGTGTGCGATTTGCTTCGCCGACCCGCCGAACCTCCCGGAGTCTGCATCACCGGAGTTTCGGAGCTTTGTGGAGTGCTGCCTGAAAAAGGAATCCGGTGAGAGGTGGACTACAGCTCAGCTCTTGACCCATCCATTTGTATGTAAAGAGCCGGAATCTTGTTAA 963 0.5639 MALVHHRHRRHPNLRLPELTERRPRFPLPLPPNTFKPTTAGAGDTISSGDIEKLAVLGHGNGGTVYKVRHKVTSAVHALKVVNFNSDTTTCRRAFGEINILRRAADCPHIVKYHGSFEKPSGDVGILMEYMDSGTLETALKKNGTFSEQRLSTVARDVLQGLAYLHARNIAHRDIKPSNLLVNSENEVKIADFGVSKLMCRTLEACKSYVGTCAYMSPERFDPEAYGGNYNGFAADIWSLGLTLFELYVGHFPFLQSGQRPDWATLMCAICFADPPNLPESASPEFRSFVECCLKKESGERWTTAQLLTHPFVCKEPESC* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00396 320 SMART serkin_6 51 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00396 320 Pfam Protein kinase domain 52 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00396 320 MobiDBLite consensus disorder prediction 1 43 - -
Rops5g00396 320 FunFam Mitogen-activated protein kinase 2 133 319 - -
Rops5g00396 320 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Rops5g00396 320 SUPERFAMILY Protein kinase-like (PK-like) 49 315 IPR011009 -
Rops5g00396 320 CDD PKc_MAPKK_plant_like 50 313 - -
Rops5g00396 320 Gene3D Phosphorylase Kinase; domain 1 42 126 - -
Rops5g00396 320 ProSiteProfiles Protein kinase domain profile. 51 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00396 320 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 49 315 - -
Rops5g00396 320 FunFam Dual specificity mitogen-activated protein kinase kinase 37 131 - -
Rops5g00396 320 Gene3D Transferase(Phosphotransferase) domain 1 127 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00396 Rops-Chr5 6763703 6764818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00396 1 313 MAP Kinase Kinase Gene Family AT1G73500 58.544 2.19e-120 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Rops5g00396 Pkinase 1.5e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00396 K20604 - gmx:100804100 518.079