Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00387 ATGGGTTGCACAATCCGGTGCAAATTCTTCTGCGTGTATTGGACACTCTGCATCCTTTTGTCCATGTTCATGTTGTCCTTCATCATGTTCTGGATAATCATATCCCCCTCAAACGTCAAGTTCCATGTAACTGAAGCCTCTCTCATGCAGTTCAACCTCACCAGTAACAACAACACCTTATATTACAAATTCAAGGTCAACATCACAACAAGAAACCCCAACAACAACATCAAAGTGTATTATAGGAGGATCACAGCAATTGCTTGGTACAAAGATAATTACTTTGGTTATGTGAATTTGGCACCCTTTGATCAAGGTCACAAGAATACCACCTTCCTTGAGCCTGCAGTGTTTGAAGGGAACAGTGTCATCAAACTAAGAACTCAGCAACTTGCTGAGTATAAAGAAGAGACAAGTGCTGGGATTTACAATGACTTGGCAGTGGATTTGGATCTTCGAATCAAAGCAAAGTATGGAAGGTTCAAGAGTAGTGGTTTCAATCCACCCGTTGTTCAGTGTCGTCGTTTGAGAGTTCCTTTGATTTCTAATGGTACATCAGCACCTCCTTTCAAAGTCACAAAATGTGGCACTGGTTATTTCTTTGCAGATCGTGATGCTAATTCAAATGCAGGAACCTGA 639 0.4116 MGCTIRCKFFCVYWTLCILLSMFMLSFIMFWIIISPSNVKFHVTEASLMQFNLTSNNNTLYYKFKVNITTRNPNNNIKVYYRRITAIAWYKDNYFGYVNLAPFDQGHKNTTFLEPAVFEGNSVIKLRTQQLAEYKEETSAGIYNDLAVDLDLRIKAKYGRFKSSGFNPPVVQCRRLRVPLISNGTSAPPFKVTKCGTGYFFADRDANSNAGT* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00387 212 Pfam Late embryogenesis abundant protein 68 161 IPR004864 -
Rops5g00387 212 PANTHER OS05G0367900 PROTEIN 8 179 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00387 Rops-Chr5 6614546 6615184 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00387 33 207 SNARE and Associated Proteins AT1G32270 28.409 2.75e-17 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00387 - - gmx:100784278 307.375