Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00386 ATGGGTTGTGGATTCCGCTGTTTCTGCTGGATCTACTGCATAATCTACACCCTGATGTTCATGTTCATACTTTCCCTAATCATCTTCTGGATTATCATCTCCCCCTCAAGTGTCAAGTTCCATGTAACTGAAGCCTCTCTCATGCAGTTCAACCTCACCAACAACAACACCTTATATTACAAATTCAAGGTCAACATCACAGCAAGAAACCCCAACAACAACATCATAGTTTATTACAGGAAGATGACAGCAATTGCTTGGTACAAAGACAACTACTTTGGTTCTGTGAGTTTGGCACCATTTGACCAAGGTCACAAGAATACCACTTTCCTTGAGCCTGCAGTGTTTGAAGGGAACAGTGTCATCAAACTTGGAGCTAAACAGCTTGCTGAGTATAAAGAGGAGACGAGTGTTGGGATTTACAATGATTTAGCTGTGGATTTGGACGTGAGAATCAGAGCAAAGTATGGGAGGTTCAAGAGTAGTCGTTTTAATCCACCCATTGTGCAGTGTCGTCGTTTGAGAGTTCCTTTGATTTCAAATGGAACATCAGCACCACCACCTCCTTTCAACGTCACAAGATGTAGCTCTGGCCAATTCTTTAGGGATCGTGATGCAGATGCAGGAGCCTGA 633 0.4313 MGCGFRCFCWIYCIIYTLMFMFILSLIIFWIIISPSSVKFHVTEASLMQFNLTNNNTLYYKFKVNITARNPNNNIIVYYRKMTAIAWYKDNYFGSVSLAPFDQGHKNTTFLEPAVFEGNSVIKLGAKQLAEYKEETSVGIYNDLAVDLDVRIRAKYGRFKSSRFNPPIVQCRRLRVPLISNGTSAPPPPFNVTRCSSGQFFRDRDADAGA* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00386 210 PANTHER OS05G0367900 PROTEIN 7 177 IPR044839 GO:0098542
Rops5g00386 210 Pfam Late embryogenesis abundant protein 65 164 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00386 Rops-Chr5 6602177 6604662 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00386 32 207 SNARE and Associated Proteins AT1G32270 27.933 6.97e-17 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00386 - - gmx:100784278 301.982