Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00384 ATGGGTTGTGGATTCCGCTGCTTCTGCTGGATCTACTGCATAATATACACCCTGATGTTCATGTTCATACTTTCCCTAATCATCTTCTGGATTATCATCTCCCCCTCAAGTGTCAAGTTCCATGTAACTGAAGCTTCCCTCATGCAGTTCAACCTCACCAGCAACAACACCTTATATTACAAAATTTACAAATTCAAGGTCAACATCACAGTAAGAAACCCCAACAACAACATCATAGTGTATTACAGGAAGATCACAGCAATTGATTGGTACAAAGATAATGACTTTGCTTATGTGAATTTGTCACCCTTTGATCAAGGTCACAAGAATACCACTTTTCTTGAGCCTGCAGTGTTTGAAGGGAACAGTGTGATCAAACTTGGAGCTCAACAACTTCGTGAGTATAAAGAGGAGACACTTGTGGGAATTTACAATGACTTGACTGTGGATTTGGACCTTAGAATCAGAGCAAAGTATGGAAGGTTCAAGAGTAGTCGTTTCAATCCACCCATTGTGCAGTGTCGTCATTTGAGAGTTCCTTTGATTTCAAATGGTACATTAGATAATGGTTGGAAAAAGAACAAGAATCCGTCTACATGTTCGAAACAAGGATCATTCTACATGTTCAATGTCCAGATAATGGTTGGAAAAAGCTTTCCAAATACCCAGAAGAAAACTAAGTCTTCAAAGCAACTTTATGAACCGAATGTGAGTGCAACAGAGTATATAAACCAAGAAAGGATCAAGGAAGGCACATGTCCAATAGTGTGGTAA 774 0.3915 MGCGFRCFCWIYCIIYTLMFMFILSLIIFWIIISPSSVKFHVTEASLMQFNLTSNNTLYYKIYKFKVNITVRNPNNNIIVYYRKITAIDWYKDNDFAYVNLSPFDQGHKNTTFLEPAVFEGNSVIKLGAQQLREYKEETLVGIYNDLTVDLDLRIRAKYGRFKSSRFNPPIVQCRHLRVPLISNGTLDNGWKKNKNPSTCSKQGSFYMFNVQIMVGKSFPNTQKKTKSSKQLYEPNVSATEYINQERIKEGTCPIVW* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00384 257 Pfam Late embryogenesis abundant protein 68 167 IPR004864 -
Rops5g00384 257 PANTHER OS05G0367900 PROTEIN 7 180 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00384 Rops-Chr5 6592392 6593165 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00384 32 193 SNARE and Associated Proteins AT1G32270 30.303 1.25e-14 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00384 - - gmx:100784278 265.003