Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00383 ATGGGTTGCAGTTTCCGCTGCTTCTGCTGCACAATCTACACCCTTATGTTCATGTTCGGTATTTCCACCATCATCTTCTGGATAGTCATCTCCCCCTCAAGTGTCAAGTTCCATGTAACTGAAGCCTCCCTCATGGAGTTCAACCTCACCAGCAGCAACACCTTATACTACAAATTCAAGGTGAACATCACAGCAAGAAACCCCAACAACAACATCAAAGTGTATTATAGGAGGATCACAGCAATTGCTTGGTACAAAGATAATGAATTTGCTTATGTGAGTTTGGCACCCTTTGACCAAGGTCACAAGAATACCACTTTCCTTGAGCCTGCAGTGTTTGAAGGACACACTGTGATCCATCTCGGACCTAAACAACTTGCTGAGTATAAAGAGGAGACACATGTTGGGATTTACAATGATTTGGCTGTGGATTTGGATCTTAGAATCAGAGCTAAGTATGGAAGGATCAAGAGCAGTCGTTTCAATCCACCCATTGTTCAGTGTCGTCGTTTAAGAGTTCCTTTGATTTCAAATGGTACATCAGCATCTCCTTTCAACGTCACCAAATGCAGAACTGGTTATTTCTTTGTAGATCGTGATGCAGATGCGGATGACTGA 618 0.4288 MGCSFRCFCCTIYTLMFMFGISTIIFWIVISPSSVKFHVTEASLMEFNLTSSNTLYYKFKVNITARNPNNNIKVYYRRITAIAWYKDNEFAYVSLAPFDQGHKNTTFLEPAVFEGHTVIHLGPKQLAEYKEETHVGIYNDLAVDLDLRIRAKYGRIKSSRFNPPIVQCRRLRVPLISNGTSASPFNVTKCRTGYFFVDRDADADD* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00383 205 PANTHER OS05G0367900 PROTEIN 5 174 IPR044839 GO:0098542
Rops5g00383 205 Pfam Late embryogenesis abundant protein 62 159 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00383 Rops-Chr5 6564106 6564723 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00383 29 202 SNARE and Associated Proteins AT1G32270 26.286 1.69e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00383 - - gmx:100784278 298.13