Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00382 ATGGGTTGTGGATTCCGCTGCTTCTGCTGGATCTACTGCATAATCTACACCCTTATGTTCATATTCTTACTTTCCCTAATCATCTTCTGGATAATCATCTCTCCCTCTAGTGTCAAGTTCCATGTAACTGAAGCCTCCCTCATGGAGTTCAACCTCACAAACAACAACACCTTATATTACAAATTCAAGGTCAACATCACAGCAAGAAACCCCAACAACAACATCATAGTTTATTACAGGAAGATGACAGCAATTGCTTGGTACAAAGATAATGACTTTGCTTATGTGAATTTGGCACCCTTTGATCAAGGTAACAAGAATACCACTTTTCTTGAGCCTGCAGTGTTTGAAGGGAACAGTGTCATCAAACTTGGAGCTAAACAGCTTGCTGAGTATAAAGAGGAGACGAGTGTTGGGATTTACAATGATTTGGCTGTGGATTTGGACATGAGAATCAGAGCAAAGTATGAAAGGTTCAAGAGTAGTCGTTTTAATCCACCCATTGTGCAGTGTCGTCGTTTGAGAGTTCCTTTGATTTCAAATGGAACATCAGCACCACCTCCTTTCAACGTTTCAAGATGTAGCTCTGGCCAATTCTTTAGGGATCGTGATGCTGCAGATGCATGA 627 0.4115 MGCGFRCFCWIYCIIYTLMFIFLLSLIIFWIIISPSSVKFHVTEASLMEFNLTNNNTLYYKFKVNITARNPNNNIIVYYRKMTAIAWYKDNDFAYVNLAPFDQGNKNTTFLEPAVFEGNSVIKLGAKQLAEYKEETSVGIYNDLAVDLDMRIRAKYERFKSSRFNPPIVQCRRLRVPLISNGTSAPPPFNVSRCSSGQFFRDRDAADA* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00382 208 Pfam Late embryogenesis abundant protein 65 161 IPR004864 -
Rops5g00382 208 PANTHER OS05G0367900 PROTEIN 7 177 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00382 Rops-Chr5 6557786 6558412 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00382 32 205 SNARE and Associated Proteins AT1G32270 26.857 1.44e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00382 - - gmx:100784278 298.516