Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00380 ATGCCATTGATACACTGCTATTCTTTCTCCTCCAATGCATCACCATCTTCCACTGTTACTTTTGCCAGCTTTGGAATTGGAGGGTTCAGTGCCACCACTTCCAAGCTCCTCCCCAAAACGACGTGTCGTTTTCCCTTTTCCTCCACCAGGAGGAACCGCTTTCGTGCTGCAGTGATCAGAGCCAAAGCGGGAACCGATTATTACTCCACCTTGAATGTGAGCAGCAATGCTACTCTGCCAGAAATCAAGAGTTCCTATAGGAAACTGGCTCGCAAGTACCATCCAGATATGAACAAAAGCCCTGGGGCAGAGGAGAAGTTCAAGGAGATAAGTGCTGCATATGAGGTCCTATCAGATGATGAGAAAAGATCTTTATATGATCGCTTTGGTGAGTCAGGTCTACAAGGAGAAAATGGAGGGCCAGCCAGTGCTTCAGGGGTTGATCCTTTTGATTTATTCGATGCATTCTTTGGTCGTTCGGATGGACTATTTGGAGATAGTGATGAAGGGCGCTTCAACTTCAATTTGAGAAGCAACAGAAACCGTGGTCATAATATTCGGCAGGACCTTCATTTGAGCTTTGAAGAATCAATTTTTGGAGGACAAAGGGAGATTGAAATTTCTTGTTTGGAGACATGTAATGATTGTGATGGTACAGGAGCTAAATCGAAAAATTGCATTAAACAATGCACAAATTGTGGTGGCAGAGGAGGAGAAATGAAAAGTCAGAAAACACCCTTTGGGATGATGTCTCAGGTTTCTGCCTGCTCTAAGTGTGGTGGTCTTGGCAAGATAATCACTGATCACTGTCGAAGGTGTGATGGCAATGGTCAGGTGCAAGCTAAACGAACAATGGAAGTGCTCATTCCTCCTGGGGTCAATGATGGAGATACAATGCAAATTCGAGGAGAAGGGAATTTTGATAAGAAGAGGCGTAATACTGGGGATCTTTTTGTTGTCCTCCATGTAGATGAAAAGCAAGGAATTTGGAGGGAGGGTCTTCATTTATACTCAAAGGTTAACGTTGACTTCACAGAGGCAATATTGGGGTCTGTTAAAAAGGTAGAAACTGTTGAAGGTTTAAGGGATCTCCATATTCCTTCTGGGATTCAACCTGGAGATTCAGTGAAGTTCTCACGTTTGGGAGTTCCTGACATGAATAAACCATCTGTTCGAGGCGATCATTACTTCATTGTGAATGTTCTTATTCCTAAAAATATCAGTGGCACCGAACGAGCACTTGTTGAGCAGTTAGCTTCACTAAGAGCATCTAGCAAAGGTGACTCATTGTCTTCTAATGACATTGGGATGCCTAAAGGAAAATTCAATGAATTCATAAAGAGGGATCCAAAAAGTGATGCTTCAAGCAAGGAAACCAAAAATGTTGATTCTCTATGGACATCAATCAAGAACTTCTTGAGGGGAGGACAGTCTGAAGAAAGGTTTGCTTCAATTAGCCAGCATACATCAGCGTCATTGTGGAGATTTGGCCACCAAAATCATTCAGTCCCAGATTCCATTTTTGTTGCTTTCATTTTAACTTGGATTTTTGCATCTATAGCAAAATCTAAGTACACGTTATTTCAGAAAAGAACCTAA 1599 0.4228 MPLIHCYSFSSNASPSSTVTFASFGIGGFSATTSKLLPKTTCRFPFSSTRRNRFRAAVIRAKAGTDYYSTLNVSSNATLPEIKSSYRKLARKYHPDMNKSPGAEEKFKEISAAYEVLSDDEKRSLYDRFGESGLQGENGGPASASGVDPFDLFDAFFGRSDGLFGDSDEGRFNFNLRSNRNRGHNIRQDLHLSFEESIFGGQREIEISCLETCNDCDGTGAKSKNCIKQCTNCGGRGGEMKSQKTPFGMMSQVSACSKCGGLGKIITDHCRRCDGNGQVQAKRTMEVLIPPGVNDGDTMQIRGEGNFDKKRRNTGDLFVVLHVDEKQGIWREGLHLYSKVNVDFTEAILGSVKKVETVEGLRDLHIPSGIQPGDSVKFSRLGVPDMNKPSVRGDHYFIVNVLIPKNISGTERALVEQLASLRASSKGDSLSSNDIGMPKGKFNEFIKRDPKSDASSKETKNVDSLWTSIKNFLRGGQSEERFASISQHTSASLWRFGHQNHSVPDSIFVAFILTWIFASIAKSKYTLFQKRT* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00380 532 Gene3D - 213 277 - -
Rops5g00380 532 FunFam Molecular chaperone Hsp40/DnaJ family protein 329 421 - -
Rops5g00380 532 SUPERFAMILY HSP40/DnaJ peptide-binding domain 185 323 IPR008971 GO:0006457|GO:0051082
Rops5g00380 532 FunFam Molecular chaperone DnaJ 205 282 - -
Rops5g00380 532 SUPERFAMILY Chaperone J-domain 63 165 IPR036869 -
Rops5g00380 532 Gene3D - 183 319 - -
Rops5g00380 532 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Rops5g00380 532 SUPERFAMILY HSP40/DnaJ peptide-binding domain 331 415 IPR008971 GO:0006457|GO:0051082
Rops5g00380 532 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 38 423 - -
Rops5g00380 532 Gene3D - 330 421 - -
Rops5g00380 532 ProSiteProfiles Zinc finger CR-type profile. 200 282 IPR001305 GO:0031072|GO:0051082
Rops5g00380 532 Pfam DnaJ C terminal domain 187 404 IPR002939 -
Rops5g00380 532 FunFam Chaperone protein dnaJ A6 chloroplastic 63 169 - -
Rops5g00380 532 CDD DnaJ_zf 213 277 IPR001305 GO:0031072|GO:0051082
Rops5g00380 532 CDD DnaJ_C 185 407 - -
Rops5g00380 532 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Rops5g00380 532 Hamap Chaperone protein DnaJ [dnaJ]. 63 472 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Rops5g00380 532 Pfam DnaJ domain 66 127 IPR001623 -
Rops5g00380 532 PRINTS DnaJ domain signature 68 86 IPR001623 -
Rops5g00380 532 PRINTS DnaJ domain signature 102 122 IPR001623 -
Rops5g00380 532 PRINTS DnaJ domain signature 86 101 IPR001623 -
Rops5g00380 532 PRINTS DnaJ domain signature 122 141 IPR001623 -
Rops5g00380 532 Pfam DnaJ central domain 213 277 IPR001305 GO:0031072|GO:0051082
Rops5g00380 532 CDD DnaJ 66 119 IPR001623 -
Rops5g00380 532 SMART dnaj_3 65 122 IPR001623 -
Rops5g00380 532 Gene3D DnaJ domain 63 166 IPR036869 -
Rops5g00380 532 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 200 280 IPR036410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00380 Rops-Chr5 6547601 6556302 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00380 67 127 C2H2 Transcription Factor Family AT1G74250 43.284 1.02e-07 52.8