Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops5g00379 | ATGCCAATCTCACACAAACTCTCTTCTTCCTTCTTCTTCTTTCTTCTTCTCCCTCTTCTCTCCAACTCAGATCTCCTTTCTGAACGCACCGCACTCTTATCCCTACGCGCCTCCGTGGGTGGCAGAACCCTCCTCTGGAACACCACTTTCACCAACCCATGCAACTGGGCCGGTGTCAAATGCAACCAAAACAACACCCACGTGGTGGAGCTTCGCCTTCCCGGAGTTGCTCTCTCCGGCGACCTCCCCGCAGGCGTGTTCTCCGAGCTCCCTAACCTCCACACCCTCAGCCTCCGCTTCAATGCCCTCACCGGAAACCTCCCCGCAGACCTTGCCGGTTGCTCCTCCCTCAGAAACCTCTACCTTCAGCAGAACCTTTTTTCCGGTGAAGTTCCGGCGACCCTTTTCCGGCTAACCGGACTTGTGAGACTCAACTTGGCAGGGAACAACTTTTCCGGCGAGGTTCCGGTGGGGTTCCGGAACTTAACCCGGTTGAGGACACTGTTGCTACAGAACAACCGGTTTACCGGGTCACTGCCTGAGTTGACTGGGGGTCAACTCGCTCAGTTCAATGTCTCAAACAATATGCTCAATGGTTCAGTTCCTGAAAAGTTGCAAACTTTTGGTAAAGATTCGTTTTTGGGTAATTTCCTATGTGGGAAACCCCTTAATCCTTGTCCTGGGGATGCCAATAGTCCTAAAGGGTCTCCAAATGTTAATGGGTCTTCTTCAGGTGCGGTTGGAGTTGGAGACAATGGGGTGAAGGATATGGGGGGAAAGAAGAAGAGCAAGTTATCTGGTGGAGCCATTGCTGGAATTGTTATTGGGGTTGTGGTAGTTCTTTTGTTTGTTGCTTTTGCTTTGATTCTTTTGTGTAGAAAAAAGAGTGGAGAGAAAAAGACTAGTTCTTTTGATGACTTGGCAGCAACTGTGAAGCATGATGAGGTGGAAATTGGGGGTCAAAATGTGGAGAATGGTAATGGGTACTCAGTGGTGGCAGGGAATGGTGGTGTTAGGGGTGAAGGGGTTGTTGGTGGTGGTGGAGCTAAAAAGTTGGTGTTTTTTGGTAATTCGGGTAAGGTGTTTGATTTGGAGGATTTGCTTAGAGCTTCTGCTGAGGTTTTGGGGAAAGGAACTTTTGGGACTGCTTATAAGGCTGTTTTGGAGGCTGGACCTGTGGTGGCTGTGAAGAGGTTGAAGGATGTGACCATTTCTGAGAAGGAATTCAAGGAGAAGATTGAAGTGGTTGGAGCAATGGATCATGAAAATTTGGTCCCTCTCAGGGCTTACTATTATAGCAGGGATGAGAAGCTTCTTGTTCATGATTACTTGTCAATGGGAAGCTTATCTGCACTTTTGCATGGAAACAAAGGAGCAGGTAGAACACCACTGAATTGGGAAATCAGATCAGGCATTGCACTTGGAGCTGCTCGTGGCATTGAGTACCTACATTCACAAGGGCCTAATATTTCTCATGGAAACATAAAATCATCAAACATCCTCCTAACCAAATCCTATGATGCCAAAGTATCTGATTTTGGCCTTTTACACCTTGTCGGTCCTTCATCCACACCCAACAGAGTTGCTGGTTACCGTGCTCCCGAAGTAACCGATCCTCGCAAAGTATCTCAAAAGGCAGATGTATACAGCTTTGGTGTGTTACTCTTGGAACTTCTCACTGGAAAGGCTCCAACTCATGCACTCTTAAATGAGGAAGGAGTGGACCTTCCAAGGTGGGTGCAATCAGTTGTTAAAGAAGAGTGGACTTCTGAGGTCTTTGATCTTGAGCTTCTTAGGTATCAAAATGTTGAAGAGGAAATGGTTCAGTTGTTGCAACTTGCAGTAGATTGTGCAGCTCCATACCCTGATAACCGCCCTTCAATGTCTGAAGTGAGAAAGCACATAGAAGAGTTACGTAGGTCTAGCTTGAAAGAGGGTCAAGACCAAATCCAACAACCTGATTTGATCAATGATATAGATGATATATCTTCTCGATGA | 1998 | 0.47 | MPISHKLSSSFFFFLLLPLLSNSDLLSERTALLSLRASVGGRTLLWNTTFTNPCNWAGVKCNQNNTHVVELRLPGVALSGDLPAGVFSELPNLHTLSLRFNALTGNLPADLAGCSSLRNLYLQQNLFSGEVPATLFRLTGLVRLNLAGNNFSGEVPVGFRNLTRLRTLLLQNNRFTGSLPELTGGQLAQFNVSNNMLNGSVPEKLQTFGKDSFLGNFLCGKPLNPCPGDANSPKGSPNVNGSSSGAVGVGDNGVKDMGGKKKSKLSGGAIAGIVIGVVVVLLFVAFALILLCRKKSGEKKTSSFDDLAATVKHDEVEIGGQNVENGNGYSVVAGNGGVRGEGVVGGGGAKKLVFFGNSGKVFDLEDLLRASAEVLGKGTFGTAYKAVLEAGPVVAVKRLKDVTISEKEFKEKIEVVGAMDHENLVPLRAYYYSRDEKLLVHDYLSMGSLSALLHGNKGAGRTPLNWEIRSGIALGAARGIEYLHSQGPNISHGNIKSSNILLTKSYDAKVSDFGLLHLVGPSSTPNRVAGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSVVKEEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCAAPYPDNRPSMSEVRKHIEELRRSSLKEGQDQIQQPDLINDIDDISSR* | 666 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops5g00379 | 665 | Pfam | Leucine rich repeat N-terminal domain | 27 | 62 | IPR013210 | - | |
Rops5g00379 | 665 | FunFam | Probable inactive receptor kinase At1g48480 | 444 | 646 | - | - | |
Rops5g00379 | 665 | Gene3D | Ribonuclease Inhibitor | 187 | 226 | IPR032675 | - | |
Rops5g00379 | 665 | ProSitePatterns | Protein kinases ATP-binding region signature. | 375 | 397 | IPR017441 | GO:0005524 | |
Rops5g00379 | 665 | MobiDBLite | consensus disorder prediction | 645 | 665 | - | - | |
Rops5g00379 | 665 | MobiDBLite | consensus disorder prediction | 228 | 254 | - | - | |
Rops5g00379 | 665 | MobiDBLite | consensus disorder prediction | 231 | 247 | - | - | |
Rops5g00379 | 665 | SUPERFAMILY | Protein kinase-like (PK-like) | 373 | 636 | IPR011009 | - | |
Rops5g00379 | 665 | ProSiteProfiles | Protein kinase domain profile. | 369 | 637 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops5g00379 | 665 | Gene3D | Phosphorylase Kinase; domain 1 | 348 | 443 | - | - | |
Rops5g00379 | 665 | Pfam | Protein kinase domain | 372 | 634 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops5g00379 | 665 | Pfam | Leucine rich repeat | 81 | 126 | IPR001611 | GO:0005515 | |
Rops5g00379 | 665 | FunFam | pollen receptor-like kinase 1 | 340 | 443 | - | - | |
Rops5g00379 | 665 | MobiDBLite | consensus disorder prediction | 642 | 665 | - | - | |
Rops5g00379 | 665 | Gene3D | Transferase(Phosphotransferase) domain 1 | 444 | 662 | - | - | |
Rops5g00379 | 665 | PANTHER | OS05G0588300 PROTEIN | 12 | 642 | - | - | |
Rops5g00379 | 665 | SUPERFAMILY | L domain-like | 45 | 207 | - | - | |
Rops5g00379 | 665 | Gene3D | Ribonuclease Inhibitor | 26 | 183 | IPR032675 | - | |
Rops5g00379 | 665 | FunFam | Probable inactive receptor kinase RLK902 | 25 | 183 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops5g00379 | Rops-Chr5 | 6537760 | 6540682 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops5g00379 | 24 | 654 | Receptor kinase-like Gene Family | AT1G48480 | 61.692 | 0.0 | 763 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Rops5g00379 | Pkinase | 4.9e-39 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops5g00379 | - | - | gmx:100781597 | 866.685 |