Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00350 ATGAAGAACATTCTTAAGAAGCTTCATATCATGTCTAACCAATCAGAAAACAAACAAGGGTCTTCTTCTTCATCAGAGGGAAACAAGTCCAATCATGGTTCATCTTCATCTTCATCTTCTAAGAAGCTTTTGCGCTCTAAGTCCCCTCAAAGTTCTGAGCATAAACCCTTTTCTGGGCTCTCTAGTTGGTTGCATTCAGTTGCTAACAGGCAGAGTCCTAGTCCTCCATGTTTGAACCAAGCAAGAGGAGAGAGAATGCAGCCATCTGATACAGTAAGCAGTGGTGGTTTGGATATTGTTTCAGATTCAGTGTCTAGTGCTTCAAGGAATCCTGAAGTAGAGGAAGAGTATCAGATACAACTTGCTTTAGAACTGAGTGCAAAGGAGGATCCAGAGGCTGTGCAGATTGAAGCTGTTAAGCAGATCAGTTTAGGCTCTTGTGACCCTGATAATACACCAGCTGAAGTTGTGGCATACAGATATTGGAATTACAATGCTCTTGGTTATGATGACAAAATCTTGGATGGTTTCTATGATCTGTATGGGGTCTTAACCGAGGCAACCTCTGCAAGAATGCCTTCCCTTGTAGATCTGCAAGGAAGACCAATCTCGGGTAGTGTCACGTGGGAAGCTGTCTTGGTTAATAGGGCAGCTGATTCTAATTTGTTGAAACTTGAGCAAAAGGCCCTAGAGCTGACTGTCAAATCAAGACCTGATTCTGGAGTAGTTATAGACAGCAATTTGGTGCGGAAGCTTGCAATATTTGTGGCTGATTATATGGGTGGACCAATTGGGGATCCTGAAAGCATGAAAAGAGCATGGAGGAGTCTTAGTTACAGTCTGAAAGCAACCCTTGGTAGCATGGTTTTGCCACTTGGTTCTCTAACTATTGGATTGGCTCGGCATCGTGCATTGTTATTTAAGGTTCTAGCTGATAGTTTGGGCATCCCATCTCGGTTGGTGAAAGGACTGCAATATACAGGTTCTGATGATGTGGCATTAAACTTTGTCAAGATTGATGATGGAAGGGAGTACATTGTTGACCTAATGGCAGATCCCGGAACTCTTATTCCATCTGATGCAGCAACTGGATCACATATTGAGTATGATGAATCCTTTTTTATGGCCAGTCCTTCATCAAGAGACCTTGATTCCTCTCATGTAGCATCATCTAGCAGTGGGGTTGGAAGTTCTTCTTCAGATTTTGGGATGTTAGACCGAGGGAGCAGATCAAATCATTATTCCTATGCAGAGAAAAAATCTGATGTAAGCAGGGCCACCACAGGAAAGGAAGAATCAATGAGACCCTTGGCTGAATTCAAAAGTTCCCACAATGTTGAGAAGATCATGGGGCAGGAAGCTCCTGGCAGACCTAATCATCCATATGTGCACACAAGATCTTCTTCTTGGACTGAAGGGATCAGTTCCCCTGCAGTACGTAGAATGAAAGTCAATGATGTTTCCCAATATATGATTGATACTGCCAAGGAGAACCCTCAGTTAGCCCAGAAACTTCATGATGTTTTACTTGAAAGTGGTGTTGTTGCTCCTCCAAATTTATTTTCTGACATTTATCATGAGGAGTTAAGTTCCCTAGCTGAAGCCAACGTCCCAACTGAAGAAAAAGATGAACATAAACAGGGAAGTGGACGGCAGGAAACTGAGGTTGAAGATAATCTTAGTCCTGCTCAATTTTTGCCTCCTTTGCCTCATTACAGAGTTCATCCCAAAGCAAGTTCTAGCAGTCAACTGGAACATTCTAAGCCTGTAGAAGGTTTAGGAATCAGCCTTCCTCTTCATACAAGGGAAGCAGCTGGACAGCAGATACCAACTCAGGTAAAATATGGGAAAAATGTCCCTGTTGCTGCAGCAGCAGCAGCTGCCGCCGCCGTTGTTGCATCTTCTATGGTAGTTGCTGTGGCAAAGTCAAGCACTGACTCAAACATTGAGCTTCCAGTAACGGCAGCTGCTACTGCTGCAGCTGTAGTAGCAACCACTGCTGCTGTCAGTAAACAGTATGAGCAGAGCTGTCGAAGTGATGGAGATACAGACAGTGCTGGTTATGAACTGAAGGGTAGTGGTGATGGAGAGCATATTGCTTTTGGATCAAATTTAGAAGGCGAGAGAAGATCTGATAGCTCAGTAGTAAGTAATGATAGCAGAAAATCTGATTCTGCACTAGATGATGTTGCTGAGTATGAGATTCCATGGGAGGAAATCACGTTGGGTGAGCGTATCGGACTTGGATCGTATGGGGAGGTGTACCGTGGAGAATGGCGTGGAACTGAAGTTGCTGTAAAGAGGTTTCTACATCAAGATATATCTGGTGAATCACTTGAAGAATTCAAAAGTGAGGTCAAAATAATGAAAAGATTGAGGCATCCAAATGTCGTTCTCTTCATGGGAGCTGTAACCCGACCACCAAATCTTTCAATTGTTACTGAATTTCTTCCCAGAGGAAGTTTGTATAGATTGATTCACCGGCCAAACAGTCAATTAGATGAGCGAAGACATTTGAGAATGGCCCTTGATACTGCTCGAGGAATGAACTATTTGCACAACTGCAGTCCAATGATTGTGCATCGTGATTTGAAGTCCCCAAATCTTCTTGTTGACAGAAATTGGGTTGTAAAGGTATGTGATTTTGGCTTATCGCGTATGAAGCATAGCACATTCCTCTCTTCCAGATCAACTGCAGGAACAGCGGAGTGGATGGCTCCTGAAGTGTTGAGAAATGAACCGTCAAATGAAAAGTGCGACGTTTATAGCTTTGGGGTCATATTATGGGAGCTCTCTACTTTGAGGCAACCCTGGGGAGGAATGAATCCAATGCAAGTTGTTGGTGCTGTGGGTTTTCAACATCGCCGTCTTGACATTCCGGATAATATGGACCCTGCCATTGCAGATATTGTCAGGAAATGCTGGCAGACAGATTCGAAGTTGAGACCTACATTTGCTGAAATATTGGCGGCTTTGAAGCCATTACAGAAGCCAATTATTGGTTCTCAAGTGCCTCGACCAAGTAGGCATGAGAAGGCTCAATCATCAGTTGCAGAAGATCAAGAAAGATAG 3072 0.4352 MKNILKKLHIMSNQSENKQGSSSSSEGNKSNHGSSSSSSSKKLLRSKSPQSSEHKPFSGLSSWLHSVANRQSPSPPCLNQARGERMQPSDTVSSGGLDIVSDSVSSASRNPEVEEEYQIQLALELSAKEDPEAVQIEAVKQISLGSCDPDNTPAEVVAYRYWNYNALGYDDKILDGFYDLYGVLTEATSARMPSLVDLQGRPISGSVTWEAVLVNRAADSNLLKLEQKALELTVKSRPDSGVVIDSNLVRKLAIFVADYMGGPIGDPESMKRAWRSLSYSLKATLGSMVLPLGSLTIGLARHRALLFKVLADSLGIPSRLVKGLQYTGSDDVALNFVKIDDGREYIVDLMADPGTLIPSDAATGSHIEYDESFFMASPSSRDLDSSHVASSSSGVGSSSSDFGMLDRGSRSNHYSYAEKKSDVSRATTGKEESMRPLAEFKSSHNVEKIMGQEAPGRPNHPYVHTRSSSWTEGISSPAVRRMKVNDVSQYMIDTAKENPQLAQKLHDVLLESGVVAPPNLFSDIYHEELSSLAEANVPTEEKDEHKQGSGRQETEVEDNLSPAQFLPPLPHYRVHPKASSSSQLEHSKPVEGLGISLPLHTREAAGQQIPTQVKYGKNVPVAAAAAAAAAVVASSMVVAVAKSSTDSNIELPVTAAATAAAVVATTAAVSKQYEQSCRSDGDTDSAGYELKGSGDGEHIAFGSNLEGERRSDSSVVSNDSRKSDSALDDVAEYEIPWEEITLGERIGLGSYGEVYRGEWRGTEVAVKRFLHQDISGESLEEFKSEVKIMKRLRHPNVVLFMGAVTRPPNLSIVTEFLPRGSLYRLIHRPNSQLDERRHLRMALDTARGMNYLHNCSPMIVHRDLKSPNLLVDRNWVVKVCDFGLSRMKHSTFLSSRSTAGTAEWMAPEVLRNEPSNEKCDVYSFGVILWELSTLRQPWGGMNPMQVVGAVGFQHRRLDIPDNMDPAIADIVRKCWQTDSKLRPTFAEILAALKPLQKPIIGSQVPRPSRHEKAQSSVAEDQER* 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00350 1023 FunFam PAS domain-containing protein tyrosine kinase family protein 818 1006 - -
Rops5g00350 1023 CDD STKc_MAP3K-like 746 992 - -
Rops5g00350 1023 MobiDBLite consensus disorder prediction 385 404 - -
Rops5g00350 1023 MobiDBLite consensus disorder prediction 413 473 - -
Rops5g00350 1023 Pfam Ethylene-responsive protein kinase Le-CTR1 154 357 - -
Rops5g00350 1023 MobiDBLite consensus disorder prediction 1 96 - -
Rops5g00350 1023 Gene3D Transferase(Phosphotransferase) domain 1 819 1001 - -
Rops5g00350 1023 MobiDBLite consensus disorder prediction 537 553 - -
Rops5g00350 1023 Coils Coil 1021 1023 - -
Rops5g00350 1023 SUPERFAMILY Protein kinase-like (PK-like) 721 991 IPR011009 -
Rops5g00350 1023 MobiDBLite consensus disorder prediction 1000 1023 - -
Rops5g00350 1023 MobiDBLite consensus disorder prediction 413 442 - -
Rops5g00350 1023 ProSitePatterns Protein kinases ATP-binding region signature. 746 767 IPR017441 GO:0005524
Rops5g00350 1023 MobiDBLite consensus disorder prediction 674 722 - -
Rops5g00350 1023 MobiDBLite consensus disorder prediction 8 96 - -
Rops5g00350 1023 ProSitePatterns Serine/Threonine protein kinases active-site signature. 859 871 IPR008271 GO:0004672|GO:0006468
Rops5g00350 1023 Gene3D Phosphorylase Kinase; domain 1 733 817 - -
Rops5g00350 1023 PRINTS Tyrosine kinase catalytic domain signature 853 871 IPR001245 GO:0004672|GO:0006468
Rops5g00350 1023 PRINTS Tyrosine kinase catalytic domain signature 814 827 IPR001245 GO:0004672|GO:0006468
Rops5g00350 1023 PRINTS Tyrosine kinase catalytic domain signature 919 941 IPR001245 GO:0004672|GO:0006468
Rops5g00350 1023 PRINTS Tyrosine kinase catalytic domain signature 900 910 IPR001245 GO:0004672|GO:0006468
Rops5g00350 1023 PRINTS Tyrosine kinase catalytic domain signature 963 985 IPR001245 GO:0004672|GO:0006468
Rops5g00350 1023 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 51 1002 - -
Rops5g00350 1023 MobiDBLite consensus disorder prediction 534 589 - -
Rops5g00350 1023 Pfam Protein tyrosine and serine/threonine kinase 740 991 IPR001245 GO:0004672|GO:0006468
Rops5g00350 1023 SMART serkin_6 740 1000 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00350 1023 ProSiteProfiles Protein kinase domain profile. 740 1000 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00350 1023 FunFam Serine/threonine-protein kinase isoform 1 731 818 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00350 Rops-Chr5 5826261 5842586 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00350 1 1007 MAP Kinase Kinase Kinase AT1G73660 63.018 0.0 1185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Rops5g00350 PK_Tyr_Ser-Thr 1.2e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00350 - - gmx:100816332 1556.96