Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00322 ATGTCTCCATACCAGTATGAACAAGACAACAACCACTATGCCACCGACGATGAAGGATTCAAGGAAGACATGGCCGCGCTAGCACGAGTCTGCATGATCGTTGCTCCTGATCCAGAGAACCCGCAATTGGCCGCCGGAGACACTGACTCTGACTCTGACTCCGACGATGAATGGAGTGATATGGGATTTGTTAAGAGAGTGCAGAGTCTCACTGCAACAATGACGACAACAACTATATCTCTGACCACTGACTCTGACAGTGACGACTATGAAGATGACTTTGAGAATGCCCGTGCCATTTTCAAACGATTTTCAAACAATATCGAAGGTAACCCTGAAGGTAAAAGTGAAATGGAAACATTGACTAAGGGGGACCAGGAGGACATTGCTAACAGCTCCCTCTATTCCAAATCAGATGCTGTTAGTGAATCATGCCCTGTTTCTCAACACCCCAATACCACCAATTTGGTTATTGGTGACAACAAAACACAGCATGGTGATTTTGTTGATAGTTATGAACCTGATGCTGGTGCTGAATCATGTCCTGTTCCTCAAAATCCTGATACCACCAATTCGGTGACTAGTAGCATCGAAAAGCAGCTCAGTGATTTTGTTGACAGTTATGAACCTGATGCTGGTGAGTCATCCAACTTACCACAAAGAAGATCAAGCTTTCCTCCAGCAGTTCATGCTTTAGTTGATGCCATCAAGAAAAATAGGGCTCTCCAGAAATTTCATAGAAGTAAGTTGATCATGCTTGAAGCAAAAATCCAGGAAAGCAAACAGATAAGGGACAAAGTTAAAATCCTTAAGGGCTTTCAGATTTCATGCAGTAGAAGAACAGGGAGTGCTTTATCACTGAATATGGATCCTCGTGTTCAGTTGATATTAGCAAGAAAGAGTCCTGCTCCAGATAACACAAAGCAAAATGATGCTTCTCAAGGACAAGTGAGAAAGCCAGAGGATGCAATTAATTTGATCGGTGATGATGATGATATGATTCTGGCATGCCTGGTGAGGAACAAATCAAAGAAAAACAGTCAAGCTGCTAAAGGAGGTAGTTCAAACTCTTCTTCTAAGCCAACCATCATAGCTGATGGCAGTGGACCCACAAACATCAATGAGGAAGAAGATGATGACCTGCTTGCTTCCTTCTTACAAAACAAGAAAAAGAGGCAGGGAAAAGGACCCAATATTCCCAAAGGCAAATGA 1212 0.429 MSPYQYEQDNNHYATDDEGFKEDMAALARVCMIVAPDPENPQLAAGDTDSDSDSDDEWSDMGFVKRVQSLTATMTTTTISLTTDSDSDDYEDDFENARAIFKRFSNNIEGNPEGKSEMETLTKGDQEDIANSSLYSKSDAVSESCPVSQHPNTTNLVIGDNKTQHGDFVDSYEPDAGAESCPVPQNPDTTNSVTSSIEKQLSDFVDSYEPDAGESSNLPQRRSSFPPAVHALVDAIKKNRALQKFHRSKLIMLEAKIQESKQIRDKVKILKGFQISCSRRTGSALSLNMDPRVQLILARKSPAPDNTKQNDASQGQVRKPEDAINLIGDDDDMILACLVRNKSKKNSQAAKGGSSNSSSKPTIIADGSGPTNINEEEDDDLLASFLQNKKKRQGKGPNIPKGK* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00322 403 MobiDBLite consensus disorder prediction 143 161 - -
Rops5g00322 403 MobiDBLite consensus disorder prediction 299 320 - -
Rops5g00322 403 MobiDBLite consensus disorder prediction 143 195 - -
Rops5g00322 403 MobiDBLite consensus disorder prediction 38 59 - -
Rops5g00322 403 MobiDBLite consensus disorder prediction 345 369 - -
Rops5g00322 403 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 15 306 - -
Rops5g00322 403 MobiDBLite consensus disorder prediction 345 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00322 Rops-Chr5 5479419 5481003 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00322 217 301 MYB-Related Transcription Factor Family AT3G18100 50.588 1.67e-18 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00322 K09422 - gmx:778073 224.557