Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops5g00319 | ATGGATATTGAAGAGGACATCCGTGCTTTGCAGCTTGAGTCAGCAGAAGACAATAATGGGGTTGTAAGTACAGAGGATGGAAAGACAGAAGAAGTTGAGAAATCTATTAAGATGGACGAAGATCCAAAGCAGGAGGTTCAGGCACAGCCTGCCCAGGCTGAGCCAAAAGATAAGGAAGTTCCTCCTCTGCAAGATGAAGAAGATGAGGTGGAGATGAATAAGAAAAGACACTTAAATGTCGTGTTTATTGGTCATGTGGATGCTGGTAAGTCTACAACAGGAGGCCAGATACTTTACCTCAGTGGTCAGGTTGATGAACGGACTATCCAAAAATATGAGAAAGAAGCTAAGGACAAAAGCAGAGAAAGCTGGTATATGGCTTATATAATGGACACTAACGAGGAGGAGAGAGTAAAGGGAAAGACTGTTGAAGTTGGAAGAGCACATTTTGAGACAGAGACTTCAAGATTTACAATTTTGGATGCACCTGGTCACAAGAGTTATGTCCCTAACATGATCAGTGGTGCATCTCAAGCTGATATTGGAGTGTTGGTAATTTCTGCTCGAAAAGGAGAATTTGAAACTGGATATGAGAGAGGTGGACAAACCCGTGAGCATGTTCAGCTTGCGAAAACACTGGGCGTGGCTAAGCTGCTTGTTGTCGTGAATAAAATGGATGATCCTACAGTGCAGTGGTCAAAGGAAAGGTATGATGAAATTGAGTCAAAAATGACACCATTTCTGAAGCAATCAGGGTACAATGTGAAGAAAGATGTCCTGTTTTTACCTATATCTGGGCTGATTGGTACAAACCTAAAAACAAGAGTGGATAAAAGCATTTGTCCATGGTGGGATGGTCCTTGCCTATTTGAAGCTCTTGACGCAGTTGAAGTTCCTCCGCGAGATCCCAAAGGTCCTTTCAGGATGCCTATACTTGACAAATTCAAAGACATGGGAACTGTTGTTATGGGCAAAGTGGAATCTGGTACTGTTTGTGAGGGAGATTCCCTGTTGGTTATGCCAAATAAGGATCAAGTAAAAGTTGTTGCTATATTTATTGATGAGAATCGGGTTAAACGTGCTGGACCTGGTGAAAATTTACGGATTAGATTATCTGGTGTTGAAGAAGAAGACATACTAACTGGGTTTGTCCTGTCTAGTATTGCAAATCCAATACCAACTGTTACCGAGTTTGTTGCTCAGCTGGCAATCCTTGAATTGCTAGACAATGCTATTTTTACTGCTGGATACAAGGCTATTCTGCATATCCACTCTGTAGTTGAAGAATGTGAGGTTATTGAGCTCATACATCAGATTGATCCAAAGACAAAGAAGCCTATGAAAAAGAAAGTTCTCTTTGTGAAGAATGGTGCAGGTGTTGTGTGTCGAATTCAGGCTAGTAACTCCATATGCATTGAGAAATTTGCAGATTTTCCGCAACTTGGGAGATTCACTCTTCGCTCTGAAGGAAAAACTATTGCTGTGGGAAAAGTCACTGGTTTCTAA | 1506 | 0.415 | MDIEEDIRALQLESAEDNNGVVSTEDGKTEEVEKSIKMDEDPKQEVQAQPAQAEPKDKEVPPLQDEEDEVEMNKKRHLNVVFIGHVDAGKSTTGGQILYLSGQVDERTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETETSRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVAKLLVVVNKMDDPTVQWSKERYDEIESKMTPFLKQSGYNVKKDVLFLPISGLIGTNLKTRVDKSICPWWDGPCLFEALDAVEVPPRDPKGPFRMPILDKFKDMGTVVMGKVESGTVCEGDSLLVMPNKDQVKVVAIFIDENRVKRAGPGENLRIRLSGVEEEDILTGFVLSSIANPIPTVTEFVAQLAILELLDNAIFTAGYKAILHIHSVVEECEVIELIHQIDPKTKKPMKKKVLFVKNGAGVVCRIQASNSICIEKFADFPQLGRFTLRSEGKTIAVGKVTGF* | 502 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops5g00319 | 501 | Gene3D | - | 58 | 299 | IPR027417 | - | |
Rops5g00319 | 501 | FunFam | Putative translation elongation/initiation factor family protein | 393 | 501 | - | - | |
Rops5g00319 | 501 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 67 | 310 | IPR027417 | - | |
Rops5g00319 | 501 | Gene3D | Translation factors | 394 | 501 | - | - | |
Rops5g00319 | 501 | FunFam | Eukaryotic peptide chain release factor GTP-binding subunit ERF3A | 56 | 299 | - | - | |
Rops5g00319 | 501 | FunFam | Eukaryotic peptide chain release factor GTP-binding subunit ERF3A | 303 | 389 | - | - | |
Rops5g00319 | 501 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 75 | 301 | IPR000795 | GO:0003924|GO:0005525 | |
Rops5g00319 | 501 | CDD | EF1_alpha | 79 | 300 | - | - | |
Rops5g00319 | 501 | SUPERFAMILY | EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 396 | 500 | IPR009001 | - | |
Rops5g00319 | 501 | Pfam | Elongation factor Tu C-terminal domain | 392 | 499 | IPR004160 | - | |
Rops5g00319 | 501 | MobiDBLite | consensus disorder prediction | 23 | 44 | - | - | |
Rops5g00319 | 501 | CDD | eRF3_C_III | 393 | 499 | - | - | |
Rops5g00319 | 501 | Pfam | Elongation factor Tu domain 2 | 319 | 385 | IPR004161 | GO:0005525 | |
Rops5g00319 | 501 | PANTHER | TRANSLATION FACTOR | 67 | 499 | - | - | |
Rops5g00319 | 501 | MobiDBLite | consensus disorder prediction | 1 | 70 | - | - | |
Rops5g00319 | 501 | Gene3D | Translation factors | 304 | 389 | - | - | |
Rops5g00319 | 501 | CDD | eRF3_II | 306 | 387 | - | - | |
Rops5g00319 | 501 | ProSitePatterns | Translational (tr)-type guanine nucleotide-binding (G) domain signature. | 131 | 146 | IPR031157 | - | |
Rops5g00319 | 501 | Pfam | Elongation factor Tu GTP binding domain | 75 | 280 | IPR000795 | GO:0003924|GO:0005525 | |
Rops5g00319 | 501 | PRINTS | GTP-binding elongation factor signature | 174 | 185 | IPR000795 | GO:0003924|GO:0005525 | |
Rops5g00319 | 501 | PRINTS | GTP-binding elongation factor signature | 218 | 227 | IPR000795 | GO:0003924|GO:0005525 | |
Rops5g00319 | 501 | PRINTS | GTP-binding elongation factor signature | 79 | 92 | IPR000795 | GO:0003924|GO:0005525 | |
Rops5g00319 | 501 | PRINTS | GTP-binding elongation factor signature | 158 | 168 | IPR000795 | GO:0003924|GO:0005525 | |
Rops5g00319 | 501 | SUPERFAMILY | Translation proteins | 298 | 391 | IPR009000 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops5g00319 | Rops-Chr5 | 5401320 | 5413037 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops5g00319 | 75 | 496 | Eukaryotic Initiation Factors Gene Family | AT5G60390 | 36.941 | 4.16e-94 | 291 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops5g00319 | K03267 | - | gmx:100784412 | 879.011 |