Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00309 ATGGGAAGTATTGTGACAGAGAAAGTAAAGCTTCTTGTGGCATTACTTACACTACAGTTCTGCTTTGCAGGATTTCACATTGTCTCTAGACTTGCATTAAACATTGGTGTCAGCAAAGTTGTTTACCCCGTTTATAGAAATTTAATTGCCTTGCTTTTGTTGAGTCCACTTGCTTATTTATTAGAAAAGAATCAAAGACCACCTCTTACTGTATCTTTATTGGTTCAGTTCTTCCTATTGGCATTATTGGGGATCACTGCAAACCAAGGGTTTTACTTGTTGGGATTGTATTATGCTTCTCCAACTTTTGCTTCTGCAATGCAAAACTCAGTTCCTGCAATTACTTTTGTCTTGGCCACTGCTTTAAGACTTGAGGAAGCCAACATAGCAAGGAGAGATGGAATGGCAAAAGTTCTAGGAACCATTGCCAGTGTGGGGGGTGCCACTATAATTACCCTTTACAAAGGACCTCCTCTTCTTCACCTGCAGACTAACCAAATAAAAGGAGACACCTTAGAAGTAGATCAGTCTTCAACAAGAATGCAAAATTGGACATGGGGTTGCATATACTTGCTTGGACATTGTTTATCATGGGCTGGATGGATGGTTTTTCAGGGAATTGTAGCATCTGGCATTGTCATCTCTCTCCAAACATGGTGTATTCAAAAGGTTGGTCCTGTGTTTGTTGCTGTCTTTCAGCCCATACAAACTTTTCTAGTTGCTGTCATGGCAGCACTAATTCTTGGAGATCAGTTATACTCTGGAGGGGTAATTGGTGCAATTCTCATTGTGCTTGGTCTATACTTGGTCCTATGGGGAAAAACCAATGACAAAAAAGTGACAGAGCCATCCTTAACAAAGCCCTTGCTTAATGAAGAAGAGAATAAAGTTACTGATGCAGCTTCAAGAGACATACCTTGA 921 0.4028 MGSIVTEKVKLLVALLTLQFCFAGFHIVSRLALNIGVSKVVYPVYRNLIALLLLSPLAYLLEKNQRPPLTVSLLVQFFLLALLGITANQGFYLLGLYYASPTFASAMQNSVPAITFVLATALRLEEANIARRDGMAKVLGTIASVGGATIITLYKGPPLLHLQTNQIKGDTLEVDQSSTRMQNWTWGCIYLLGHCLSWAGWMVFQGIVASGIVISLQTWCIQKVGPVFVAVFQPIQTFLVAVMAALILGDQLYSGGVIGAILIVLGLYLVLWGKTNDKKVTEPSLTKPLLNEEENKVTDAASRDIP* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00309 306 SUPERFAMILY Multidrug resistance efflux transporter EmrE 196 275 - -
Rops5g00309 306 Pfam EamA-like transporter family 200 271 IPR000620 GO:0016020
Rops5g00309 306 Pfam EamA-like transporter family 14 151 IPR000620 GO:0016020
Rops5g00309 306 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 140 - -
Rops5g00309 306 PANTHER WAT1-RELATED PROTEIN 203 278 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00309 Rops-Chr5 5260699 5262773 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00309 4 303 Nodulin-like Gene Family AT3G18200 56.667 1.18e-135 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00309 - - vra:106768622 468.388