Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00308 ATGGACGAAAGCGCAGAGACCCACAAGCGTGAATCTGATTCAGAAAACAAGGATGATAATCTTGTTGCGTCGAAGAAGTCAAAGATCGAATCTTCAGAAGTTGGTTTGGACAAAGAGAATGCTTCAAAGGAAGTAACTTTCCACATTGAAGCTGATGCTGCTGAAGATAAGGGTTCGAGACATACCATGGAAGATGCATGGGTGGTTCTTCTCGATGCAACTGTAGATTATCCTGGAAATTTGAGATGTGCACACTTTGCAATTTATGATGGACATGGAGGCCGGTTAGCTGCGGAATATGCACAGAAGCATTTGCATGGAAATGTTCTTTCAGCAGGATTACCACGTGAGTTGTTGGATGTAAAGACAGCTAAAAGATCTATACTTGATGGTTTTCGTAAAACTGATGAGTCTCTTCTTCAAGAAAGTGCTGAAGGGGGATGGCAGGATGGTGCTACAGCCGTATGTGTTTGGGTGTTGGGACAAAAAGTTTTTGTTGCAAATGTAGGAGATGCCAAAGCAGTTTTAGCTCGGTCAACTATAATTGAGGGATCCCAAGAAAATTCAGATGGAGTCCATGCACTGAAGGCCATTGTTTTGACAAGAGAACACAAACCTATCTTTCCACAGGAGCGTACACGCATTCAGAAGGCTGGTGGTGTTGTGAGCTCAAATGGACGAGTACAAGGGCGTCTAGAAGTTTCTAGGGCTTTTGGAGATCGCCAGTTTAAAAAGGTGGGTGTTACTGCAATCCCAGATATCCATTCTTTTGACCTTACTGATAGGGAGCGATTCATCATTCTTGGCTGTGATGGCTTGTGGGGGGTATTTGGTCCCTGTGATGCTGTTGATTTTGTTCAAAAGTTATTGAATGAGGGCCTATCTGTTACAGCTGTGAGCCGCCGTCTTGTCAGGGAAGCTGTCCGTGAGCGTCGCTGCAGAGATAACTGCACTGCCATCGTCATTGTATTCAAGCACAATTAA 984 0.4431 MDESAETHKRESDSENKDDNLVASKKSKIESSEVGLDKENASKEVTFHIEADAAEDKGSRHTMEDAWVVLLDATVDYPGNLRCAHFAIYDGHGGRLAAEYAQKHLHGNVLSAGLPRELLDVKTAKRSILDGFRKTDESLLQESAEGGWQDGATAVCVWVLGQKVFVANVGDAKAVLARSTIIEGSQENSDGVHALKAIVLTREHKPIFPQERTRIQKAGGVVSSNGRVQGRLEVSRAFGDRQFKKVGVTAIPDIHSFDLTDRERFIILGCDGLWGVFGPCDAVDFVQKLLNEGLSVTAVSRRLVREAVRERRCRDNCTAIVIVFKHN* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00308 327 MobiDBLite consensus disorder prediction 1 37 - -
Rops5g00308 327 ProSiteProfiles PPM-type phosphatase domain profile. 50 324 IPR001932 -
Rops5g00308 327 SUPERFAMILY PP2C-like 46 325 IPR036457 -
Rops5g00308 327 CDD PP2Cc 54 324 IPR001932 -
Rops5g00308 327 Gene3D - 30 327 IPR036457 -
Rops5g00308 327 Pfam Protein phosphatase 2C 54 312 IPR001932 -
Rops5g00308 327 PANTHER PROTEIN PHOSPHATASE 2C 28 322 IPR015655 GO:0004722|GO:0006470
Rops5g00308 327 FunFam Probable protein phosphatase 2C 67 38 326 - -
Rops5g00308 327 SMART PP2C_4 46 322 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00308 Rops-Chr5 5251735 5257590 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00308 47 276 PP2C-type Phosphatase Gene Family AT1G18030 76.087 1.44e-132 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00308 K17500 - mnt:21396468 485.337