Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00306 ATGCATGCTAAGACAGATTCAGAGGTTACAAGCCTTGCTGCTTCATCCCCTACAAGATCCCCACCTCGTCGTCCTCTCTATTATGTTCAAAGTCCCTTAAGGGATTCTCATGATGGTGAAAAAACAGCCACTACTTCCTTCCATTCCACTCCTCTTCTAAGCCCTGCAGCTTCTCCTCCTCACTCTTCCTCTTCCACACGCTTCTCTGCCCCTCAACGGAAGAAGGAGCATAGCCTTGAGCCATGGAAGCAAATTGATGTTATTGAGGAAGAAGGGCTTCTACAAGGGGAAGATCGCCACAAAACCCTTCCTCGTTATTGCTACTTCTTTGCTTTTGTTCTTGGCTTCTTTATGCTTTTCTCTTTCTTCTCACTCATCTTATGGGGTGCCAGTAGACCCATGAAACCTGAGATTTCCATCAAGAGCATAAATTTTGATCATGTTAGGGTCCAAGCTGGTTCGGATTCTACTGGGGTGGCCACTGATATGATCACAATGAATTCTACTTTGAAATTCACATACCGAAACACTGGCACATTCTTTGGGGTCCATGTTACAGCTACACCCTTAGACCTGTCCTATTCAGAAATCGTGATTGCTTCAGGGAATATGAAGGAGTTTTATCAATCTAGAAAGAGTCAAAGGTTGGTTAGTGTAGCAGTTGTGGGCACCAGGATCCCTTTGTATGGAAGTGGTGCTAGCTTGAGCAGCACAACTGGTGTGCCAACAGTGCCAGTGCCATTGAACCTGAACTTTGTGGTGAGATCTAGAGCTTATGTTCTTGGGAAATTGGTGAAGCCTAAGTACTACAAGAAAATTAGATGTTCCATCACTTTGGATCCCAAAAAGCTTAATGCTCCAGTTTCCCTCAAGAAGTCTTGCACATATGATTGA 894 0.4441 MHAKTDSEVTSLAASSPTRSPPRRPLYYVQSPLRDSHDGEKTATTSFHSTPLLSPAASPPHSSSSTRFSAPQRKKEHSLEPWKQIDVIEEEGLLQGEDRHKTLPRYCYFFAFVLGFFMLFSFFSLILWGASRPMKPEISIKSINFDHVRVQAGSDSTGVATDMITMNSTLKFTYRNTGTFFGVHVTATPLDLSYSEIVIASGNMKEFYQSRKSQRLVSVAVVGTRIPLYGSGASLSSTTGVPTVPVPLNLNFVVRSRAYVLGKLVKPKYYKKIRCSITLDPKKLNAPVSLKKSCTYD* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00306 297 MobiDBLite consensus disorder prediction 43 69 - -
Rops5g00306 297 Pfam Late embryogenesis abundant protein 172 266 IPR004864 -
Rops5g00306 297 MobiDBLite consensus disorder prediction 1 81 - -
Rops5g00306 297 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 99 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00306 Rops-Chr5 5232038 5233738 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00306 - - gmx:100811519 466.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00140 2 2108063 2109821 Rops5g00306 5 5232038 5233738 PCT