Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00288 ATGGGAAGTATTGTGACAAAGAAAGTAAAGCTTCTTGTGGCATTAGTTACACTACAGTTCTGCTTTGCAGGACTTCACATTGTCTCTAGACTTGCATTAAACATTGGTGTCAGCAAAGTTGTTTACCCCGTCTATAGATATTTAATTGCCTTGCTTTTGTTGAGTCCACTTGCTTATTTATTAGAAAAGAATCAAAGACCACCTCTTACTGTATCTTTATTGGTTCAGTTCTTCCTATTGGCATTATTGGGGATCACTGCAAACCAAGGGTTTTACTTCTTGGGATTGTATTATGCTTCTCCAACTTTTGCTTCAGCAATGCAAAACTCAGTTGCTGCAATCACTTTTGTCTTGGCCACTGCTTTAAGACATGAGGAAGCCAACATAGCAAGGAGAGATGGAATGGCAAAAGTTCTAGGAACCATCGCCAGTGTGGGGGGTGCCACTATAATTACTCTTTACAAAGGACCTCCTCTTCTTCACCTGAAGACTAACCAAATACACAGAGACGCCTTAGAAGTAGATCAGTCTTCAACAAGAATGCAAAATTGGACATGGGGTTGCATATACTTGCTTGGACATTGTTTATCATGGGCTGGATGGATGGTTTTTCAGGCTCCTGTGGTGAAGAAGTATCCAGCAAAACTGACACTTACTTCGTTTACATGTGTCTTCGGATTGATCCAAATCTTGATCATAGCAGCCTTCACAGAAAATGACTTTGAAAAATGGAAGATACAATCAGCAGAGGAGCTTTTTACCATCCTATATGCTGGTGGTCCTGTGTTTGTTGCTGTCTTTCAGCCCATACAAACTTTTCTAGTTGTTGTCATGGCAGCACTAATTCTTGGAGATCAGTTATACTCTGGAGGGGTAATTGGTGCAATTCTCATTGTGCTTGGTCTATACTTGGTCCTATGGGGAAAAACCAATGACAAAAAAGTGACAGAGCCATCCTTAACAAAGCCCTTGCTTAATGAAGAAGAGAATAAAGTTACTGATGCAGCTTCAAGAGACATACCTTGA 1026 0.4045 MGSIVTKKVKLLVALVTLQFCFAGLHIVSRLALNIGVSKVVYPVYRYLIALLLLSPLAYLLEKNQRPPLTVSLLVQFFLLALLGITANQGFYFLGLYYASPTFASAMQNSVAAITFVLATALRHEEANIARRDGMAKVLGTIASVGGATIITLYKGPPLLHLKTNQIHRDALEVDQSSTRMQNWTWGCIYLLGHCLSWAGWMVFQAPVVKKYPAKLTLTSFTCVFGLIQILIIAAFTENDFEKWKIQSAEELFTILYAGGPVFVAVFQPIQTFLVVVMAALILGDQLYSGGVIGAILIVLGLYLVLWGKTNDKKVTEPSLTKPLLNEEENKVTDAASRDIP* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00288 341 SUPERFAMILY Multidrug resistance efflux transporter EmrE 256 310 - -
Rops5g00288 341 PANTHER WAT1-RELATED PROTEIN 12 313 IPR030184 GO:0016020|GO:0022857
Rops5g00288 341 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 142 - -
Rops5g00288 341 Pfam EamA-like transporter family 15 151 IPR000620 GO:0016020
Rops5g00288 341 Pfam EamA-like transporter family 186 259 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00288 Rops-Chr5 4456523 4458603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00288 4 338 Nodulin-like Gene Family AT3G18200 61.944 1.86e-153 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00288 - - vra:106768622 523.472