Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00273 ATGGGGTGGGATCTCTTTGAGTGCTGCTTCACTAGCACTTCTTCTGACACATTTCCAAGGCAAAGTAAGTTGAAGTGGCGAATCTTCTCCTACAGGCAACTTACAAAAGCCACAAATAATTTTGATCAACGTCATTGTCTTGAAAGGAGAGGCTCCGCCACAGTATATTATGGAAAACTTAAGGATGGACGGGAGATTGCCATCCAGCACTTTAATGAAAATAAGTGCCACATATTGCAACAGTTTATCAATGAAACTGAAATCCTAAATCACATGCCCCACAAGAATCTTGTATCAATTCATGGGTGCGCCTCTCATCACAAGGAATACCTGCTTGTACATGAATACCTATCCAATGGAACTCTTGCTGCTCATCTTAAAGGCAAAATAGCAGAAAGCAGGACATTACCTTGGCATACCCGATTGGATATTGCCATTGATACTGCAAATGCATTGGACTATCTTCACTATAATGGCATCATCCACCGTAATGTAAAGTCCAACAATATTCTCCTTGATAAGAACTTTGGTGCTAAAGTTGCTAACTTTCATTTATCACGAAAGCTTCCAGAAGGTGTTCCTGTCGATGCTACTCATGTTACCAGTGATATAATAGGAACATGTGGTTATATAGACCCAGAGTATGTGTCAAAAGGCTTGCTTAGTGTCCAAAATGATGTTTATAGTTTTGGGGTGGTACTGTGTGAGCTCATATCATCAGTGCTTGCAGAATATTGGGTTCGTAGTGAAGAGGATAGTCTTGCTACCCTTTTATGCACAAAAATTGAAAACCAAGCTTTGGTGGAGCTCTTGGATCCAAGACTTGGCTTCCAATCAGACCTTAAGATCAAGCAAATGATGACTGCTACGGCTGAGCTTGCATTTCGTTGCTTGCAATGTCCACAAGATTTAAGGCCAAACATGGAACAGGTGGTGGAGACTCTCAATGGCATAAAGCAAGGGAAATATGAAACAGGCTCGATGAAAGCATTCAAAATCTTCCACCATACTGAACTTGAAGAAGCTACTAACCATTTTAACACTTTCCTTGGAAAGGGAGGGTACGGCAGCGTCTACTATGGAAAACTTCAAGATGGGCAAGAGGTTGCAATCAAACGTTTCCATGAGGAAACGGACAAAACCATTAAGCAATTCATGAAAGAGATTGAGATCTTAAGTCTCTTGCAACATAAAAATCTGGTTTCACTTTATGGCTGCAGTTCTCGTCATAGCAACAAACATATGCTAGTGTATGAGTACATCCCCAATGGCACTATTTCTGACCATCTTCATGGATCTTCTTGTGGTAAACTACCATGGCTTACTAGATTGAATATTGCCATTGAAACTGCAATTGCCTTGGTATATCTTCACGAGTCAGGGATCATCCACCGTGATGTAAAAGGGAGCAATATCCTGTTGGATGAAAATTTTACTGTTAAAGTTGCAGATTTTGGACTCTCACGGTTTCTTCCAGATTATGTTACTCATGTTTCAACTATTCCAGTAGGAACTCGTGCTTACATAGATCCATACTATTATGAATCTGGAAGGGTCAGTGACAAAAGTGATGCTTATAGCTTTGGGGTGGTCTTGTTTGAGCTCATATCATCCAACCCCCCAAGTTTAATGGAAGGCACAGAGCGTGTTACTCTTGCCCAATTTGCAAAGAGTAAAATCTTAAACAACGCATTGGAGGAGCTAGTGGATCCAAGTCTTGGCAGTGGTAGAGTTAGCATTTCAATGCGTACAGTGTCCCAAGGATCTCAGACCATCCATGAAACAGGTGCTAGAGACCTTGGAGGGAATAAGGAAGGGGACATGGGGATTCAACCAGATAACATAGTCTTTGGTTGCGTTTGA 1863 0.4128 MGWDLFECCFTSTSSDTFPRQSKLKWRIFSYRQLTKATNNFDQRHCLERRGSATVYYGKLKDGREIAIQHFNENKCHILQQFINETEILNHMPHKNLVSIHGCASHHKEYLLVHEYLSNGTLAAHLKGKIAESRTLPWHTRLDIAIDTANALDYLHYNGIIHRNVKSNNILLDKNFGAKVANFHLSRKLPEGVPVDATHVTSDIIGTCGYIDPEYVSKGLLSVQNDVYSFGVVLCELISSVLAEYWVRSEEDSLATLLCTKIENQALVELLDPRLGFQSDLKIKQMMTATAELAFRCLQCPQDLRPNMEQVVETLNGIKQGKYETGSMKAFKIFHHTELEEATNHFNTFLGKGGYGSVYYGKLQDGQEVAIKRFHEETDKTIKQFMKEIEILSLLQHKNLVSLYGCSSRHSNKHMLVYEYIPNGTISDHLHGSSCGKLPWLTRLNIAIETAIALVYLHESGIIHRDVKGSNILLDENFTVKVADFGLSRFLPDYVTHVSTIPVGTRAYIDPYYYESGRVSDKSDAYSFGVVLFELISSNPPSLMEGTERVTLAQFAKSKILNNALEELVDPSLGSGRVSISMRTVSQGSQTIHETGARDLGGNKEGDMGIQPDNIVFGCV* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00273 620 ProSitePatterns Protein kinases ATP-binding region signature. 350 372 IPR017441 GO:0005524
Rops5g00273 620 Pfam Protein tyrosine and serine/threonine kinase 54 315 IPR001245 GO:0004672|GO:0006468
Rops5g00273 620 Pfam Protein tyrosine and serine/threonine kinase 346 542 IPR001245 GO:0004672|GO:0006468
Rops5g00273 620 ProSiteProfiles Protein kinase domain profile. 41 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00273 620 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 18 323 IPR044652 GO:0004672
Rops5g00273 620 SUPERFAMILY Protein kinase-like (PK-like) 17 315 IPR011009 -
Rops5g00273 620 Gene3D Transferase(Phosphotransferase) domain 1 421 596 - -
Rops5g00273 620 Gene3D Transferase(Phosphotransferase) domain 1 117 333 - -
Rops5g00273 620 FunFam Wall-associated receptor kinase 3 117 334 - -
Rops5g00273 620 ProSiteProfiles Protein kinase domain profile. 344 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00273 620 Gene3D Phosphorylase Kinase; domain 1 12 116 - -
Rops5g00273 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Rops5g00273 620 Gene3D Phosphorylase Kinase; domain 1 334 420 - -
Rops5g00273 620 SMART serkin_6 41 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00273 620 SMART serkin_6 344 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00273 620 SUPERFAMILY Protein kinase-like (PK-like) 327 543 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00273 Rops-Chr5 4226839 4231993 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00273 333 574 Receptor kinase-like Gene Family AT1G25390 58.065 9.96e-87 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Rops5g00273 PK_Tyr_Ser-Thr 2e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00273 - - gsj:114418636 888.641