Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00247 ATGAGGTTCCTGTCCAGGTTGTGCCCCTGCTTGGATAAGCGGGGCGGCGCAGCCTCCGACGACGACGACGATGGCGACGGTGCCGACGACTCTTGGAACCTGATATTCAGCCTCCACACTCTTCAGCTCGCCACCAATTTCTTCTCCGATCTCAACCAGCTTGGTCATGGAGGTTTTGGTCCTGTTTTCAAGGGATTGATGCCAAATGGTCAAGAAGTGGCTGTTAAGAAGTTGGCATTGGAATCTAGACAAGGAATTAAAGAATTTACTAATGAAGTCAAGCTATTACTAAAACTTCAGCACAAGAACCTGGTTACTTTACTGGGTTGTTGCATAGAAGGACCTCAAAAGATGCTTGTCTATGAATATCTGCCAAACAAAAGCCTTGATCGCTTTCTATTTGATAAAAGAAGGTCTTCATCTTTGGACTGGACAACACGATTTAGAATAGTTACAGGTGTGGCAAGAGGACTTCTCTACCTGCATGAAGAGGCCCCAGAAAGAATTATTCACAGAGACATTAAAGCTAGTAACATATTGCTGGATGAGAAATTAAATCCAAAAATTTCAGACTTTGGCTTGGCAAGGCTGTTTCCTGGGGAGGACACTCATGTGCAGACATTTAAGATTGCTGGTACACATGGTTACATGGCCCCTGAATATGCAATGCGTGGATATCTGTCTGTAAAGACAGATGTTTTCAGTTATGGAGTCCTGGTGTTGGAAATAGTTAGTGGGAGAAAAAACCATGACGTACAGCTTGGTGCAGAAAAGGCAGATCTCTTGAGCTATGCATGGATGCTTTATCAAGGAGGGAAGATTATGGATTTAATTGATCCAGCCCTTGGTAAATACAATGGTGATGAGGCAACAATGTGCATTCAGCTAGGTTTATTGTGCTGTCAAGCAAGTATAATTGAGAGACCTGACATGAATACTGTTCATCTCATGCTCTCTAGTGATTCCTTCACTTTGCCAAAACCAGGTAAACCAGGAATTCAAGGTCGTGTAGGACATTGGACTACAACCACTTCTTCTGCTTTAACCAATACTAATGCTAGTAGTGGAACCAGGGCCACAGGTGGTAGTAGTTTTGTAGAGGATTATTCTAGAAATTCTATCTCTACTTCTTCTATTGATGAAGGAAGATGA 1152 0.4288 MRFLSRLCPCLDKRGGAASDDDDDGDGADDSWNLIFSLHTLQLATNFFSDLNQLGHGGFGPVFKGLMPNGQEVAVKKLALESRQGIKEFTNEVKLLLKLQHKNLVTLLGCCIEGPQKMLVYEYLPNKSLDRFLFDKRRSSSLDWTTRFRIVTGVARGLLYLHEEAPERIIHRDIKASNILLDEKLNPKISDFGLARLFPGEDTHVQTFKIAGTHGYMAPEYAMRGYLSVKTDVFSYGVLVLEIVSGRKNHDVQLGAEKADLLSYAWMLYQGGKIMDLIDPALGKYNGDEATMCIQLGLLCCQASIIERPDMNTVHLMLSSDSFTLPKPGKPGIQGRVGHWTTTTSSALTNTNASSGTRATGGSSFVEDYSRNSISTSSIDEGR* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00247 383 Gene3D Transferase(Phosphotransferase) domain 1 124 324 - -
Rops5g00247 383 FunFam Cysteine-rich receptor-like protein kinase 2 21 123 - -
Rops5g00247 383 ProSiteProfiles Protein kinase domain profile. 48 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00247 383 FunFam Cysteine-rich receptor-like protein kinase 41 124 324 - -
Rops5g00247 383 Pfam Protein tyrosine and serine/threonine kinase 52 249 IPR001245 GO:0004672|GO:0006468
Rops5g00247 383 SUPERFAMILY Protein kinase-like (PK-like) 32 318 IPR011009 -
Rops5g00247 383 CDD STKc_IRAK 54 318 - -
Rops5g00247 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Rops5g00247 383 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 13 377 - -
Rops5g00247 383 SMART serkin_6 48 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00247 383 Gene3D Phosphorylase Kinase; domain 1 27 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00247 Rops-Chr5 3726712 3731371 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00247 26 364 Receptor kinase-like Gene Family AT4G21410 51.020 2.08e-111 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops5g00247 PK_Tyr_Ser-Thr 3.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00247 - - gmx:100790304 645.195