Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00246 ATGCAAAGCAAAGAAGACTTGGGCTTGATTCTAAAGGTTTTAACTCTGCTGAGAAAACAGAGCCGGGACTCACTCTTTTGCAGCGGAATCTCTCAGGAGTTTGAATCTTCTTCAGTTGTGAAGATGTTCACATCAAGGAAGAAAATCCACAAAGATAAGGATGCTGAGCCAACTGAATTCGAGGAATCAGTCGGACAGGCATTGTTTGATCTTGAAAATACCAACCATGAGCTGAAAAGTGATCTGAAAGATTTATACATAAATTCAGCAGTGCAAATTGATGTTTCGGGCAACCGCAAGGCTGTGGTTATCCATGTCCCCTACAGATTAAGGAAAGGTTTCCGGAAGATTCATGTCAGGCTTGTTAGGGAGCTTGAGAAGAAATTTAGTGGGAAGGATGTGATCTTGATTGCCACCCGGAGGATACTAAGGCCACCAAAGAAAGGTTCTGCTGTTCAGCGTCCCCGCAGCCGTACACTCACTGCTGTGCATGAAGCAATGCTTGAGGATATTGTATTACCTGCTGAGATTGTTGGAAAGCGTGTTAGGTACAGAATTGATGGATCCAAGATCATGAAGGTGTTTTTGGACCCCAAGGAGAGAAACAACACTGAGTACAAGTTGGAGACTTTTGCTGCAGTATACAGGAAACTTTCAGGCAAAGATGTTGTGTTTGAGTATCCTATTACTGAGGCTTAG 699 0.4335 MQSKEDLGLILKVLTLLRKQSRDSLFCSGISQEFESSSVVKMFTSRKKIHKDKDAEPTEFEESVGQALFDLENTNHELKSDLKDLYINSAVQIDVSGNRKAVVIHVPYRLRKGFRKIHVRLVRELEKKFSGKDVILIATRRILRPPKKGSAVQRPRSRTLTAVHEAMLEDIVLPAEIVGKRVRYRIDGSKIMKVFLDPKERNNTEYKLETFAAVYRKLSGKDVVFEYPITEA* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00246 232 ProSitePatterns Ribosomal protein S7e signature. 120 133 IPR000554 GO:0003735|GO:0005840|GO:0006412
Rops5g00246 232 PANTHER 40S RIBOSOMAL PROTEIN S7 42 231 IPR000554 GO:0003735|GO:0005840|GO:0006412
Rops5g00246 232 Pfam Ribosomal protein S7e 48 227 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00246 Rops-Chr5 3721335 3724850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00246 42 232 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 79.058 5.18e-114 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00246 K02993 - gmx:100499757 366.696