Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00231 ATGAATCCACCAACAGAACCCAAAAATCTGGGCAGTTCAAGTGCCAATTCCAATGGAGTTAACTCAGCCCAGAGGAAGGTTTTGTCTGAGTCAAAATTTCAGCGTGGTTTCAATAGCCCAGTTATGGCAGAGTCATCAGGTGCATTAACACCCCAAGTGGGTCATAAGTTCCATGAGGTGTTTCAACTGAAACATGGAAGCTATGTAGATCTTCCAGCTTCAAAAATTTCTGAACTGATGAAATCAACCAGTTTGGATCATTTATTGATGCAGAATGCTCCCACTCAATCACTTCTTAGTGTTGTGAATGGTATCCTAGAAGAAAGTGTTGAAAGAAGAAATGGCGAAATACCCCATCGTGTGGCTTTGTTGTTGAGAAAAGTTGTTCAAGAGATTGAGAGGCGTATATCAACTCAAGCAGGACATTTGAAAACTCAAAACAATATTTTCAAGGCTCGTGAAGAAAAATATAAATCAAGAATCAAAGTACTTGAGGTCCTTGCATCTGGAACAAGGGAAGAGAGTGAGATGGTTGTTACAAGCCCGCTTCAGCAGTTAAAGAGCCCCTCAATGCAGACTGAGAATACTAAAAATGAAGAAAAGAAGGTAGATGACTCAACACAAACTGAGAAGACGAAAATTGAAGAAAAGAAGGTAGATAACCCAATACAGATTGAGAAGACTAAAATTGAAGAAAAGAAGGTAGATGACCCAATACAGACTGAGAAGACTAAAATGGAAGAAAAAAAGACAGATGAAACAATGCAGACTGAGAAGACTACACAGGAGGAAATATGGGTAGATGACAAAGAAGTTATTAGATTGAACAAAGAGCTGGAGGACAAAAATATGGAAATTTCAACATTGAAGAAAGAACTAGAAACAATGAAAAGAACATATGAAATGCAATGCTCACAGTTGGAAGGAGAAGCTAATGATGCTAAAGGAGAATTGAAACAGAAGTCACAAGAATATGAGCATCAGTTGGAAAAATTAAGAAATAAGGTGTCACAAGAATATGAGCATCAGTTGGAAAAATTAAGAAATAAGGTGAAAGAGAATGAGGCTTCTTCTGAGTCAAAATATCAGAAGTGGAACATGAAAGAGAACCAAATACAGAAAGCTGTGAATTTTCAATTTAGTTCCATACAGAAATTGAAATTGTCATGGGAGTCCATTAAACAAGATGTTATGAAAGGGCAAATGATTTATGCAGAGGAATGTAATCGATTAGGAGTAAATCTTAAATCACTAGTGGTTGCAGCTGAGAATTATCAATCAGTTCTTTCAGAAAACCGAAAACTATTTAATGAAGTTCAAGAATTAAAAGGAAATATTAGAGTATATTGTAGAATCAGACCATTTATTCCTGGACAAAAGGAAAAGCAATCCATTGTGGAACACATTGGTGAAACCGATTTGGTTGTGGCAAATCCCTCCAAACAAGGGAAAGAAGCCCTTAAAACATTTAAGTTTAACAAGGTCTTTGGTCCAGCCTCAACTCAAGTTGAGGTGTATTCTGACATTCAAGCCTTTATAAGATCAGTACTTGATGGGTATAATGTGTGTATATTTGCTTATGGCCAAACTGGTTCAGGGAAAACCTACACAATGAGTGGTCCAAATAATGCAACGAGTGAGAATGTTGGTGTTAATTATCGAGCTCTGAATGACCTCTTCAGCATATCCACAAGTAGAAAAAGCTCCATAGTCTATGACATTGGTGTTCAAATAATTGAGATATATAATGAACAAGTCCGTGATTTGTTATCAGCTGAAGCTTCTCCAAAAAAACTTGGGATATTGAGTCACTCTCAGCCAAATGGTTTAGCAGTGCCTGATGCTAGCATGCAACCTGTAAAATCAACTGCTGATGTAATTAAACTAATGGACATTGGTCTAAAGAATAGAGCCAAGGGTTCCACTGCTATGAATGAAAGAAGTAGCCGTTCACACAGTGTGGTTTCAATTCATGTTCGTGGGGAGGATAAGAAGTCTGGTTCTTCTCTTCATGGTAATCTTCATTTGGTAGATTTGGCAGGAAGTGAAAGGGTAGATCGCTCTGAAGTAACTGGTGATAGACTTAAGGAAGCACAACATATTAACAAATCACTATCTGCCCTTGGAGATGTCATTTTTTCCCTTTCTCAAAAGAGTGCCCATGTACCATATAGAAACAGCAAGCTTACTCAACTTTTGCAATCTTCTCTTGGTGGTCAAGCAAAGACACTCATGTTAGTCCAAATTAATTCAGACCATAAGTCTTATTCTGAATCTTTAAGTACTTTGAAGTTTGCTGAGAGGGTTTCTGGAGTTGAGTTAGGAGCCGCGAGAAGTACCAAAGAGGGCAGAGATGTCAGAGAATTAATGGAGCAGGTGTCTTCTCTCAAGGACACTATTTTGACAAAAGATGAGGAGATTGAGAGGTTACAGTTACTTAAGGATCTGAAAAATGTTCATCCTGGTTCTGATTAA 2475 0.377 MNPPTEPKNLGSSSANSNGVNSAQRKVLSESKFQRGFNSPVMAESSGALTPQVGHKFHEVFQLKHGSYVDLPASKISELMKSTSLDHLLMQNAPTQSLLSVVNGILEESVERRNGEIPHRVALLLRKVVQEIERRISTQAGHLKTQNNIFKAREEKYKSRIKVLEVLASGTREESEMVVTSPLQQLKSPSMQTENTKNEEKKVDDSTQTEKTKIEEKKVDNPIQIEKTKIEEKKVDDPIQTEKTKMEEKKTDETMQTEKTTQEEIWVDDKEVIRLNKELEDKNMEISTLKKELETMKRTYEMQCSQLEGEANDAKGELKQKSQEYEHQLEKLRNKVSQEYEHQLEKLRNKVKENEASSESKYQKWNMKENQIQKAVNFQFSSIQKLKLSWESIKQDVMKGQMIYAEECNRLGVNLKSLVVAAENYQSVLSENRKLFNEVQELKGNIRVYCRIRPFIPGQKEKQSIVEHIGETDLVVANPSKQGKEALKTFKFNKVFGPASTQVEVYSDIQAFIRSVLDGYNVCIFAYGQTGSGKTYTMSGPNNATSENVGVNYRALNDLFSISTSRKSSIVYDIGVQIIEIYNEQVRDLLSAEASPKKLGILSHSQPNGLAVPDASMQPVKSTADVIKLMDIGLKNRAKGSTAMNERSSRSHSVVSIHVRGEDKKSGSSLHGNLHLVDLAGSERVDRSEVTGDRLKEAQHINKSLSALGDVIFSLSQKSAHVPYRNSKLTQLLQSSLGGQAKTLMLVQINSDHKSYSESLSTLKFAERVSGVELGAARSTKEGRDVRELMEQVSSLKDTILTKDEEIERLQLLKDLKNVHPGSD* 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00231 824 Coils Coil 272 357 - -
Rops5g00231 824 MobiDBLite consensus disorder prediction 174 193 - -
Rops5g00231 824 Gene3D Kinesin motor domain 388 774 IPR036961 -
Rops5g00231 824 Gene3D - 268 308 - -
Rops5g00231 824 SMART kinesin_4 443 780 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops5g00231 824 MobiDBLite consensus disorder prediction 1 29 - -
Rops5g00231 824 MobiDBLite consensus disorder prediction 172 212 - -
Rops5g00231 824 Pfam Kinesin motor domain 451 770 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops5g00231 824 PRINTS Kinesin heavy chain signature 519 540 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops5g00231 824 PRINTS Kinesin heavy chain signature 642 659 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops5g00231 824 PRINTS Kinesin heavy chain signature 673 691 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops5g00231 824 PRINTS Kinesin heavy chain signature 722 743 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops5g00231 824 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 445 810 IPR027417 -
Rops5g00231 824 ProSiteProfiles Kinesin motor domain profile. 445 772 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops5g00231 824 Coils Coil 425 445 - -
Rops5g00231 824 PANTHER KINESIN-LIKE PROTEIN KLP-3 246 808 IPR027640 GO:0003777|GO:0007018
Rops5g00231 824 MobiDBLite consensus disorder prediction 194 212 - -
Rops5g00231 824 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 387 774 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00231 Rops-Chr5 3552104 3561723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00231 318 772 Calmodulin-binding Proteins AT5G65930 34.205 1.33e-66 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00231 K10406 - gmx:100779403 1106.66