Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00225 ATGTTCATAGAAATGTCAAAGGTAAGGGACAGAACCGAAGATTTCAAAGATGCAGTTCGACACAGTGCTCGCTCTTTAGGATACGATGAGGCTAAATTGGCATCCATTTTGGCATCTTTCATTATTCATAAACCTCCACAAAGGTCTCCATTTTCCAAAGCTGCATTGAAGACGCTCGAGAGTATTGGAGAATTGGAACAGTTTTTGTTGAAGCATAGAAAGGACTATACGGATCTGCACCGCACAACTGAACAGGAGAGAGATAGCATAGAACATGAAGTTAGTGCTTTTATTAAAACTTGCCAGGAACAAATTGATGTTCTTAAGAATAATATAAATCACGAAGAGGAAAATTCAAAAGGTTGGCTTGGCATTTCAACAACAAAGTCTAATGCTGACACCATTGCTCACAAACATGGGGTGGTTCTAATTTTAAGTGAGAGACTCCATTCAGTTACAGCACAGTTTGATCAGCTCAGAGCTGTGCGCTTCCAGGATGCTATTAATAGAGCAATACCACGAAGAAAACTTAACCGTGTGACCAAGAAAGATTCTACAGAAATCCCTAAATCAGGTGATATGGAGCTCAGAGAACCTGATGAGTTAAGCAGTGAGCCTCTAAGAGTCCAACAACAACTCTTGGATGATGAAACACGTGCCCTTCAGGTGGAATTAACCAGTCTTCTAGATACAGTTCAAGAAACCGAAACTAAGATGGTGGAAATGTCTGCACTAAATCACCTCATGTCTACACATGTTCTGCAACAATCTCAGCAGATTGAGCATCTGTATGAGCAGGCTGTTGAAGCTACTAAGAATGTTGAGCTTGGTAACAAAGAACTCTCACAAGCCATTCAGAGGAATAGCAGCAGCAGGACATTTCTTTTACTGTTTCTATTTGTGCTTACTTTTTCCATCGTCTTTCTTGATTGGTATAGTTGA 942 0.4023 MFIEMSKVRDRTEDFKDAVRHSARSLGYDEAKLASILASFIIHKPPQRSPFSKAALKTLESIGELEQFLLKHRKDYTDLHRTTEQERDSIEHEVSAFIKTCQEQIDVLKNNINHEEENSKGWLGISTTKSNADTIAHKHGVVLILSERLHSVTAQFDQLRAVRFQDAINRAIPRRKLNRVTKKDSTEIPKSGDMELREPDELSSEPLRVQQQLLDDETRALQVELTSLLDTVQETETKMVEMSALNHLMSTHVLQQSQQIEHLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIVFLDWYS* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00225 313 MobiDBLite consensus disorder prediction 179 204 - -
Rops5g00225 313 Coils Coil 98 118 - -
Rops5g00225 313 Pfam SNARE-complex protein Syntaxin-18 N-terminus 10 90 IPR019529 -
Rops5g00225 313 Gene3D - 216 310 - -
Rops5g00225 313 PANTHER SYNTAXIN-18 5 313 - -
Rops5g00225 313 FunFam Syntaxin-81 like 216 310 - -
Rops5g00225 313 SUPERFAMILY t-snare proteins 60 277 IPR010989 GO:0016020|GO:0016192
Rops5g00225 313 MobiDBLite consensus disorder prediction 179 205 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00225 69 313 SNARE and Associated Proteins AT1G51740 74.390 4.17e-115 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00225 K08492 - gmx:100778011 547.74