Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00211 ATGTCATGGATCATTTTGGCCTTCATATTCATCCTATCAGCAACCCTGATGAGGAAACTAAGCCAACATGACCGGAAACAACCACCAGGTCCAAAGGGTCTACCAATTTTGGGGAACCTCCACATGTTGGGGAACCTTCCCCACCGTACCCTTCTAACCTTGTCCAAAAGATATGGTCCTATCATGTCCCTGAAATTGGGACAGATCCCAACAATTGTGATCACCTGCCCTAAAGCTGCTGAGCTATTCCTAAAGAACCATGAATCCGTTTTTCTAAACAGACCAAAACTTGAATTTTCCAAGTACCTCTCTTATGGATACAAGGGCGTGGTGTTTGCTGAATATGGTGCATACTGGCGCAACATGAGGAAAGTGTGCACCTTGCAGCTTCTGAGTACGTCCAAAGTTGAGTCCTTTGCGCCTTTGAGGAAAAGGGAGGTGGAAGCAGCGGTTAAATTGATTCAAAAAGCAGCAATGGTGAGTGAGGTTGTGAACCTTAGTGAAGTGGTGCATGGCCTTTTAGAGGAGATTGTGTATAAAATGGTTTTGGGGTGTAGCAAGGATGACAAGTTTGATTTGAAGGGGGTTGTCCAAGAAGGGATGCTCGTGTCTGGAAAGTTTAACATTGCAGATTATGTTCCTTGGCTTGGGGCATTGGATTTACAGGGTCTAAGACGAGCCTTCAAGAAAACCAGTAAAAAAATTGATGAAATGCTGGAGAAAATAATCGAGGATCATGAAGAGGCTTCTTCTGATGTACAAAATGGGCGCCATAAGGACTTCATAGACATAATGCTCTCAATGATGCACCAACCCATCGATCCTTATGATGAACAAAACCACACCATTGATCGAACAAACATAAAGGCTATTGTCATAGACATGATTTCTGCAGCATTTGACACTTCTGCTACTGTTATTTTGTGGGCATTATCTGAGCTACTAAGGCATCCTAATGTGATGAAGAACCTTCAAGATGAGATAGGCACTATAGTAGGAATGAACAAATTGGTGGAGGAGAATGATTTAGCAAAATTAAGTTACTTGGATATGGTGATTAAGGAGACTTTTAGATTGTATCCTGCTGCTGGATCAATAAATTTCCGAGATTCAATAGAGGATACTATGATTAATGGTTATCACATAAAGAAAAAGTCACGAATTCTTATAAATGTATGGGCAATTGGGCGAGATCCAAAGGTTTGGTCTGATAATGCTGAAGTCTTTTATCCTGAGAGATTCATCAATGACAATATAGACATTCGAGGACACGACCTCAAGTTATATCCCTTTGGTTCTGGTCGTAGAGGATGCCCTGGGATGCAATTGGGTCTTGTTACTGTTAAACTTGTTTTATCTCAGTTAGTGCATTGCTTTAATTGGGAGCTTCCACAAGGCATGACTCCTAATGACTTGGACATGACTGAACAATTTGGCATCACAATGCCAAGAGCCACTCACTTGCATGCTGTGCCAACATATCGTCTTCTTAGTACACCACTTGAATGA 1509 0.4168 MSWIILAFIFILSATLMRKLSQHDRKQPPGPKGLPILGNLHMLGNLPHRTLLTLSKRYGPIMSLKLGQIPTIVITCPKAAELFLKNHESVFLNRPKLEFSKYLSYGYKGVVFAEYGAYWRNMRKVCTLQLLSTSKVESFAPLRKREVEAAVKLIQKAAMVSEVVNLSEVVHGLLEEIVYKMVLGCSKDDKFDLKGVVQEGMLVSGKFNIADYVPWLGALDLQGLRRAFKKTSKKIDEMLEKIIEDHEEASSDVQNGRHKDFIDIMLSMMHQPIDPYDEQNHTIDRTNIKAIVIDMISAAFDTSATVILWALSELLRHPNVMKNLQDEIGTIVGMNKLVEENDLAKLSYLDMVIKETFRLYPAAGSINFRDSIEDTMINGYHIKKKSRILINVWAIGRDPKVWSDNAEVFYPERFINDNIDIRGHDLKLYPFGSGRRGCPGMQLGLVTVKLVLSQLVHCFNWELPQGMTPNDLDMTEQFGITMPRATHLHAVPTYRLLSTPLE* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00211 502 Gene3D Cytochrome P450 13 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00211 502 PANTHER CYTOCHROME P450 93A3-LIKE 4 496 - -
Rops5g00211 502 FunFam Cytochrome P450 83B1 15 491 - -
Rops5g00211 502 Pfam Cytochrome P450 28 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00211 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Rops5g00211 502 CDD CYP71-like 57 488 - -
Rops5g00211 502 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00211 502 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00211 502 PRINTS E-class P450 group I signature 55 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00211 502 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00211 502 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00211 502 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00211 502 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00211 502 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00211 502 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00211 502 Coils Coil 221 241 - -
Rops5g00211 502 SUPERFAMILY Cytochrome P450 28 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00211 Rops-Chr5 3368049 3370228 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00211 1 493 Cytochrome P450 AT3G48320 37.702 1.24e-124 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00211 - - aprc:113867069 722.62