Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00209 ATGAGGAAACAAAGCCAACATGACCAGAAAGAACCACCAGGTCCAAAGGGTCTGCCAATTTTGGGGAACCTCCACATGTTGGGGAACCTTCCTCACCGTACCCTTCAAACATGGTCCAAAAGATATGGCCCCATCATGTCCCTGAAATTGGGACAGGTCCATACAGTTGTGATCTCGTCCCCTGAAGCAGCTGAGCTATTCCTAAAGACCCATGAATCAATTTTTGCAAGCAGACCAAAACTTGAAGCCTCTAAATACCTCAATTATGGATACAAGGGCTTGGTGTTTGCTGAGTATGGTGCTTACTGGCGCAACATGAGGAAAGTTTGCACCTTGCAGCTTTTGAGTACGTTGAAAGTTGAGTCCTTTGCACCTTTGAGGAAAAGGGAGGTGGAAGCAGTGGTTAAATTGATTCAAAAAGCAGCAATGGTGGGTGAGGTTGTGAACCTCAATGAAGTGGTGCAGGGCCTTTCAGAAGAGGTTGTGTATAAAATGGTGTTGGGGTGTAGCAAGGATGACAAGTTTGACTTGAAGGGGCTTGTCCATGAGGGGATGCTTATGGCTGGAAAGTTTAATCTTACCGATTATGTGCCTTGGCTTGGGGCATTGGATATACAGGGTCTAAGAAGTGGCTTCAAGAAAACTAGTAAAGCACTTGACGAAATGTTGGAGAAAATAATCAAGGACCATGAAGAGGCTTTTGACGTACAAAATGGTCGTCATAAGGACTTCATAGATATATTACTCTCAATGATGCACCAACCCATCGATCCATATGATGAACAAAACCATACCATTGATCGAACAAATATAAAGGCTATTGTCTTAGACATAATTGCTGCGGCATTTGACACTTCTGCTATTGTTATTTTATGGGCTTTATCTGAGCTCCTAAGGCATCCAAACGTGATGAAGAACCTTCAAGATGAGTTAGGCACTGTGGTAGGAATGAACAAATTGGTGGAAGAGACTGATTTAGTAAAATTAAGTTACTTGGATATAGTGATTAAGGAGACATTAAGATTGTATCCTGCTGCATCATTAACTACCCGAGAGTCAATAGAGGATACTATGATTAATGGTTATTACATCAAAAAAAATTCACGAATTCTTACAAATGTATGGGCAATTGGGCGAGATCCAAAGGTTTGGTCTGATAATGTTGATGTCTTTTATCCTGAGAGATTCATCAATGATAATATAGACATTCGAGGACATGACTTCAAGTTGTTTCCATTTGGATCTGGTCGTAGAGGATGCCCTGGGATGCAATTGGGTCTTGTTACTGTTAAACTTGTTTTATCTCAATTAGTTCATTGCTTTAATTGGGAGCTTCCACGTGGCATGACTCCTGATGACTTGGACATGACTGAGCAATATGGACTTACAATGTCAAGAGCCACACACTTGCATGCTGTGCCAACATATCGTCTTCTTAGCACACCCTTTGAATTAATGAATTAA 1464 0.4133 MRKQSQHDQKEPPGPKGLPILGNLHMLGNLPHRTLQTWSKRYGPIMSLKLGQVHTVVISSPEAAELFLKTHESIFASRPKLEASKYLNYGYKGLVFAEYGAYWRNMRKVCTLQLLSTLKVESFAPLRKREVEAVVKLIQKAAMVGEVVNLNEVVQGLSEEVVYKMVLGCSKDDKFDLKGLVHEGMLMAGKFNLTDYVPWLGALDIQGLRSGFKKTSKALDEMLEKIIKDHEEAFDVQNGRHKDFIDILLSMMHQPIDPYDEQNHTIDRTNIKAIVLDIIAAAFDTSAIVILWALSELLRHPNVMKNLQDELGTVVGMNKLVEETDLVKLSYLDIVIKETLRLYPAASLTTRESIEDTMINGYYIKKNSRILTNVWAIGRDPKVWSDNVDVFYPERFINDNIDIRGHDFKLFPFGSGRRGCPGMQLGLVTVKLVLSQLVHCFNWELPRGMTPDDLDMTEQYGLTMSRATHLHAVPTYRLLSTPFELMN* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00209 487 Gene3D Cytochrome P450 1 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00209 487 FunFam Cytochrome P450 83B1 1 473 - -
Rops5g00209 487 PRINTS P450 superfamily signature 420 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00209 487 PRINTS P450 superfamily signature 411 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00209 487 PRINTS P450 superfamily signature 281 298 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00209 487 PRINTS P450 superfamily signature 334 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00209 487 PRINTS E-class P450 group I signature 39 58 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00209 487 PRINTS E-class P450 group I signature 333 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00209 487 PRINTS E-class P450 group I signature 420 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00209 487 PRINTS E-class P450 group I signature 410 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00209 487 PRINTS E-class P450 group I signature 270 287 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00209 487 PRINTS E-class P450 group I signature 63 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00209 487 PRINTS E-class P450 group I signature 290 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00209 487 CDD CYP71-like 41 470 - -
Rops5g00209 487 Pfam Cytochrome P450 12 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00209 487 PANTHER CYTOCHROME P450 93A3-LIKE 3 478 - -
Rops5g00209 487 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 413 422 IPR017972 GO:0005506|GO:0016705
Rops5g00209 487 SUPERFAMILY Cytochrome P450 12 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00209 Rops-Chr5 3325910 3328143 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00209 2 478 Cytochrome P450 AT5G07990 41.684 1.50e-128 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00209 - - aprc:113867069 715.301