Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00208 ATGTTACCTTTAACTTTAGCAATCTCATGGATCATTTTGGCCTTCATATTCATCCTATCAGCAACCCTGATAAGGAAACAAAGCCAGCATGACCAGAAAGAACCACCAGGTCCAAAGGGTATACCAGTTTTGGGGAACCTCCACATGTTGGGGAACCTTCCACACCGTACCCTTCAAACATGGTCCAAAAGATATGGTCCCATCATGTCCCTGAAATTGGGACAAGTGCCAGCAATTGTGATCACATCCCCTGAAGCTGCTGCGTTATTCCTAAAGACCTATGAATCAGTTTTTGCAAGCAGACCAAAAATTGAAGCCTCTAAATACCTCAATTTTGGATACAAGGGCTTGGTGTTTGCTGAGTATGGTGCTTACTGGCGCAACATGAGGAAAGTTTGCACCTTGCAGCTTCTGAGTACGTCCAAAGTTGAGTCCTTTGCGCCTTTGAGGAAAAGGGAGGTGGAAGCAGCGGTTAAAATGATTCAAAAAGCAGCAATGGAGGGTGAGGTTGTTAATCTTAGTGAAATGGTGCAGGGCCTTTTAGAGGAGATTGTGTATAAAATGGTGTTGGGGTGTAGCAAGGATGACAAGTTTGACTTGAAGGGGCTTGTCCACGAGGCGTTGCTCATGGGTGGAAAATTTAATCTTGCAGATTTTGTGCCTTGGCTTGGGGCTCTGGATATACAGGGTCTAAGACGAGGCTTCAAGAAAACCAGTAAAGCACTTGACGAAATGCTGGAGAAAATAATCAAGGAGCACGAACAAGCTTTCAATGCACAAAATGGTCACCATAAGGACTTCATAGACATATTTCTCTCAATGATGCACCAACCCATCGATCCTTATGATGAACAAAACCATACCATTGATCGAACTAACATAAAGGCTATTGTCTTTGACATGATTGGTGCGGCATTTGACACTTCTGCTACTATTATTTTGTGGGCCTTATCTGAGCTACTAAGGCATCCAAATGTGATGAAGAGCCTTCAAGATGAGTTAGGCACTGTGGTAGGAATGAACAAATTGGTGGAAGAGACTGATTTAGTAGAATTAAGTTACTTGGATATGGTGATTAAGGAGACCTTTAGATTGTATCCTGCAGCATCAATTAATATCCGAGAATCAATAGAGGATACTATGATTAATGGTTATTACATAAAGAAAAATTCAAGAATTTTAATAAATGTATGGGCAATGGGGCGAGATCCTAAGGTTTGGTCTGATAATGCTGATGTCTTTTATCCTGAGAGATTCATCAATGACAATATAGACATTCGAGGACATGACTTCAAGTTGTTTCCATTTGGTTCTGGTCGCAGAGGATGCCCTGGGATGCAATTGGGTCTTGTTACTGTTAAATTTGTTTTATCTCAATTAGTGCATTGCTTTAATTGGGAGATTCCATGTGGTATGACTCCTAATGACTTGGACATGACTGAGCAATTTGGCATAACAATGCCAAGAGCCACACATTTACATGCTGTGCCAACATATCGTCTTCTTAGCACAGCCTAG 1518 0.4157 MLPLTLAISWIILAFIFILSATLIRKQSQHDQKEPPGPKGIPVLGNLHMLGNLPHRTLQTWSKRYGPIMSLKLGQVPAIVITSPEAAALFLKTYESVFASRPKIEASKYLNFGYKGLVFAEYGAYWRNMRKVCTLQLLSTSKVESFAPLRKREVEAAVKMIQKAAMEGEVVNLSEMVQGLLEEIVYKMVLGCSKDDKFDLKGLVHEALLMGGKFNLADFVPWLGALDIQGLRRGFKKTSKALDEMLEKIIKEHEQAFNAQNGHHKDFIDIFLSMMHQPIDPYDEQNHTIDRTNIKAIVFDMIGAAFDTSATIILWALSELLRHPNVMKSLQDELGTVVGMNKLVEETDLVELSYLDMVIKETFRLYPAASINIRESIEDTMINGYYIKKNSRILINVWAMGRDPKVWSDNADVFYPERFINDNIDIRGHDFKLFPFGSGRRGCPGMQLGLVTVKFVLSQLVHCFNWEIPCGMTPNDLDMTEQFGITMPRATHLHAVPTYRLLSTA* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00208 505 FunFam Cytochrome P450 83B1 22 496 - -
Rops5g00208 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Rops5g00208 505 Gene3D Cytochrome P450 20 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00208 505 SUPERFAMILY Cytochrome P450 35 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00208 505 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00208 505 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00208 505 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00208 505 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00208 505 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00208 505 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00208 505 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00208 505 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00208 505 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00208 505 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00208 505 PANTHER CYTOCHROME P450 93A3-LIKE 10 501 - -
Rops5g00208 505 Pfam Cytochrome P450 35 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00208 505 Coils Coil 163 183 - -
Rops5g00208 505 CDD CYP71-like 64 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00208 Rops-Chr5 3320602 3322869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00208 4 501 Cytochrome P450 AT5G07990 38.386 6.95e-124 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00208 - - aprc:113867069 743.806