Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00188 ATGAGAAAATTTGTGCACTTCAAAGAAAAGCTTTTTGTGTGTGGGTTTGATGGTTGTGGCATGAGATTTGCTTACAAACATGTGAGAGATAACCATGATAAAAATGGGAAACATGTTTTTACCCTTGGGGATTTTGAAGAAGCTGATGAAGAATTCAGGTCAAGGCCCAGGGGAGGGAAGAAGAGAAAATATCCTACTGTTGAAATGTTAGTGAGGAAGAGAGTTACCCCACCAAGTCGAACTGGTTACTTATGCAGGATAGTGAGGAAGATGTGTATTGATCCAATGCGATAG 294 0.4014 MRKFVHFKEKLFVCGFDGCGMRFAYKHVRDNHDKNGKHVFTLGDFEEADEEFRSRPRGGKKRKYPTVEMLVRKRVTPPSRTGYLCRIVRKMCIDPMR* 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00188 97 ProSitePatterns Zinc finger C2H2 type domain signature. 14 38 IPR013087 -
Rops5g00188 97 PANTHER ZINC FINGER PROTEIN 5 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00188 Rops-Chr5 2948619 2949016 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00188 3 41 C2H2 Transcription Factor Family AT1G72050 64.103 6.91e-11 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00188 K09191 - gmx:100801812 138.658