Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00184 ATGGCGAGTCGGTTGAAGGAAGACGAGAAAAACGAGCGCGTGATTCGAGGTCTTCTCAAGCTTCAACCGAATCGCAGATGTATTAACTGCAACAGTTTGGGACCACAATATGTGTGCACAAATTTCTGGACGTTTGTTTGCACTAACTGTAGTGGAATACACCGGGAATTTACACATCGTGTAAAATCAGTTTCAATGGCTAAATTTACTTCACAAGAAGTTAGTGCACTTCAAGAAGGAGGAAATCAGCGTGCAAGAGAAATTTATTTCAAAGAATGGGATGCGCAACGTCATTCTTTCCCTGATAGCAGTAATGTTGACAGGCTCCGAGACTTTATTAAGCATGTTTATGTGGATAGAAGATTCACAGGAGATAGGACCTCTGACAAACCACCAAGAGTAAAGGCGGGTGACAAAGATGATTCCTATGAAAACAGGAGAGTTGAAGCATATCAGGGAGGATCTAAAAGCCCTCCATATGAGGACACATATGAACGTCGTTATGGTGACAGGTCTAGTCCAGGGGGAAGAAGTCCTGGATATGATCAAGAAAGCAGGCAATATGGTGATTATAAGAGAAGTCCTGGTCGTCCTCCAATTATCAATGATTGGCGTCGTGAAGATCGTAGAATATCGGATGGAGATAATAAGGTGGAAAGCCAATCTCCAGAGCGAGCCAAAGATCTCGATTTTCCAAGCCCACCTGTGGTCCGACCTGTTAGAGATATTTTGGGAGACAATGTAGTGCCTCTTCGGATAAGTGAACCCCCCAAACCAAACAGTGGAAGGGTAGCCGAAGGCTCAGCACCGACTCAGAGAATTGCATCCTCTGGTAGCTTGGCATCCAGCAATGGAAACCCAGCAGATGTTAAGCTTGAGACTGCTAAGAGCCTTATTGATTTTGATGCTGATCCTGAACCTATTGCTTCAGCAATTCCTCAAGCCCAACAAACTACTGTGCCACAACCTGTTGTGCAGCCAGCAAATTCCAGTGATGACAATTGGGCCTCTTTTGATGTTGCTTCTGAAGCAAAAGCAACTCCAAGCCCCTCAAATTCAAATCCACTCGATAATGTGTTGTCTCAATTGTATGAAGTTCAAGGACCTGTTCCAGCATCAGCTCCTACTTCTGCTTCTGGAGCTGCCAGTCTTAGTGGTTTCTCAGCTTTCCCACCCAGTGGTGCTTCAGTACCATCTCCTGGATTGGCTACAGTGTCACCTTTGAATAATGTAGGACAATGGGCAAGTTTGCAGCATCAGCAACCATTGTTCCCTGCTGCTGCTAATCAGTCTACTACTCAACAATTTGCACCATTAGTAGGTGGTGCTGTGAATAATCAGCCATGGAGTGTACCTTCTGTACCCACAGTACAAGGGCATCCAAGTACACCTATGCCACATGCTTACCATCATGCATCAAAGCCTACCAATGAGGCGGTAAACAGTATTGTTTCTCAACCTTCTGCTGTAGAAGTAAAAGCAAGTGGAAGAAAAGAACTTCCTGAGGATCTGTTCACTGTAAAATACTCATCCTTCCCTGCTCCAGTTCCAGGTTGGCAAATGCGTATTCCCCATGGCATGGGTATCTCAATGCAATATAATAATGTGCCTGTGCCAAGTTATCTGCAGCCATCACACTCAACGAATCCATTTGATGTGAGCAGCAAACCTACCCCAGATCAAGCCCCAACTTTTCCTTCCATGTCATCCTTGCAAGGTGCCTTGCCTAGTATACCACCTTCAGGAGCAATGCGCCCTTCAAACCTGGGCCATCCATCACATGCCTGGACTCCCACCCCGTCATCATCATATGTACCAGTCCTGCCTGCACAAGCACAAGCTCATGCATCAGCATTTGGACCGAGGGCATACATGGGGCAACAGATGCCAACTAACATACAAATGCCAAGGCAAGAAGTCGGGAATTTTGGCACTGCAGGAGCCATTTTCAGCATGGCAAATCCAGATCAGCAGATGACTGGGAGAATTGTCCGCCTCTGTACTTGTAAAGTCAAGCATCAACTTGTTGCTCCCTGTACAAATGTGAAAGGGGAAGACAAATTCTGCCTTCTTGGAAGAGGGGCGCTAGCGGACTGA 2097 0.4607 MASRLKEDEKNERVIRGLLKLQPNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREFTHRVKSVSMAKFTSQEVSALQEGGNQRAREIYFKEWDAQRHSFPDSSNVDRLRDFIKHVYVDRRFTGDRTSDKPPRVKAGDKDDSYENRRVEAYQGGSKSPPYEDTYERRYGDRSSPGGRSPGYDQESRQYGDYKRSPGRPPIINDWRREDRRISDGDNKVESQSPERAKDLDFPSPPVVRPVRDILGDNVVPLRISEPPKPNSGRVAEGSAPTQRIASSGSLASSNGNPADVKLETAKSLIDFDADPEPIASAIPQAQQTTVPQPVVQPANSSDDNWASFDVASEAKATPSPSNSNPLDNVLSQLYEVQGPVPASAPTSASGAASLSGFSAFPPSGASVPSPGLATVSPLNNVGQWASLQHQQPLFPAAANQSTTQQFAPLVGGAVNNQPWSVPSVPTVQGHPSTPMPHAYHHASKPTNEAVNSIVSQPSAVEVKASGRKELPEDLFTVKYSSFPAPVPGWQMRIPHGMGISMQYNNVPVPSYLQPSHSTNPFDVSSKPTPDQAPTFPSMSSLQGALPSIPPSGAMRPSNLGHPSHAWTPTPSSSYVPVLPAQAQAHASAFGPRAYMGQQMPTNIQMPRQEVGNFGTAGAIFSMANPDQQMTGRIVRLCTCKVKHQLVAPCTNVKGEDKFCLLGRGALAD* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00184 698 MobiDBLite consensus disorder prediction 265 288 - -
Rops5g00184 698 MobiDBLite consensus disorder prediction 199 226 - -
Rops5g00184 698 SUPERFAMILY ArfGap/RecO-like zinc finger 11 123 IPR037278 -
Rops5g00184 698 MobiDBLite consensus disorder prediction 123 147 - -
Rops5g00184 698 ProSiteProfiles ARF GTPase-activating proteins domain profile. 12 130 IPR001164 GO:0005096
Rops5g00184 698 SMART arf_gap_3 12 130 IPR001164 GO:0005096
Rops5g00184 698 MobiDBLite consensus disorder prediction 313 335 - -
Rops5g00184 698 MobiDBLite consensus disorder prediction 123 288 - -
Rops5g00184 698 Pfam Putative GTPase activating protein for Arf 13 123 IPR001164 GO:0005096
Rops5g00184 698 MobiDBLite consensus disorder prediction 547 596 - -
Rops5g00184 698 MobiDBLite consensus disorder prediction 547 576 - -
Rops5g00184 698 Gene3D Arf GTPase activating protein 2 132 IPR038508 -
Rops5g00184 698 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Rops5g00184 698 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Rops5g00184 698 PRINTS HIV Rev interacting protein signature 61 82 IPR001164 GO:0005096
Rops5g00184 698 MobiDBLite consensus disorder prediction 450 472 - -
Rops5g00184 698 CDD ArfGap_AGFG 12 122 - -
Rops5g00184 698 FunFam Arf-GAP domain and FG repeat-containing protein 1 1 135 - -
Rops5g00184 698 PANTHER ARFGAP/RECO-RELATED 1 664 IPR044820 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00184 Rops-Chr5 2845391 2853123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00184 12 122 C2H2 Transcription Factor Family AT4G21160 32.759 6.15e-11 62.8