Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00175 ATGGCTAATCTCTCCAATGGCCACCCCAGTTCCTCTTCTTTCAAGATGCCCACTATCAAGTTCACCAAGCTCTTCATCAATGGAGATTTTGTTGATTCCATTTCAGGAAAGGAATTTGAGACCATAGATCCAAGAACAGGAGAGGTAATTGCAAAGATTGCAGAGGGGACAAAGGAAGATATTGATGTTGCTGTGAGAGCTGCACGCAAAGCTTTTGACGATGGTCCATGGCCTCGCATGCCCGGCGCTGAGAGAGCAAAAATTATGATGAAATGGGCAGAACTAATTGATCAAAACATAGAAGAAATAGCAGCACTAGATGCCATTGATGCTGGAAAGTTGTACCATCGGTTAAAGGCTTATGAAATTCCTTCAGCAGCAAATACTATACGTTACTATGCTGGTGCTGCTGATAAAATTCATGGAGAGGTCTTAAAACCTTCTAGGGAGTTTCATGCATACACTTTGATGGAACCGATTGGTGTTGTGGGACATATCATTCCCTGGAATTTCCCCAGCTCCATGTTTGTCACCAAGGTTGGTCCTTCCTTGGCTGCTGGTTGCACCATGGTTCTCAAGCCTGCTGAACAAACACCTCTCTCAGCTTTGTTTTATGCTCATCTAGCTAAGCTGGCTGGAATTCCAGATGGAGTGCTCAGTGTAGTACCTGGATTTGGCCCAACTGCAGGTGCTGCAATAAGCTCACACATGGACATTGACAAGGTGAGCTTTACTGGCTCAACCGAAGTAGGCCGTGAAGTAATGGCAGCCGCAGCTAGGAGTAATTTGAAACCAGTTTCACTTGAATTAGGAGGCAAGTCACCCCTTGTAATATTTGATGATGCTGAAGTGGATAAAGCTGTTGACCTTGCTCTATTGGGCGCAGTGTATAACAAGGGAGAAATTTGTGTAGCAGGTTCCCGTGTATTTGTTCAAGAAGGAATCTATGATGAATTTGAGAAGAAGTTGGTAGAGAAGGCAAAAGCTTGGGTTGTTGGGGATCCTTTTGATGCCAAAGTTCAACAAGGGCCTCAGGTTGACAAGAATCAATTTGAGAAAATTCTTTCCTATATAGAGCATGGAAAAAGAGAAGGGGCTACCCTTTTGACAGGGGGTAATAGAGTGGGCAACAAGGGCTACTACATTGAGCCTACAATTTTCTCTAATGTTAAGGAGGACATGCTTATTGCACAAGATGAAATATTTGGTCCCGTGATGGCACTAATGAAGTTTAAGACCATTGAAGAAGCAATTAGAAGTGCTAACAACACCAAATATGGCTTAGCAGCAGGCATTGTGACCAAGAACTTGGACATAGCAAACACTGTGTCAAGGTCAATTCGTGCTGGCATTATTTGGATCAACTGTTATTTTATCTTTGGGAATGACATTCCTTATGGAGGTTACAAAATGAGTGGTTTTGGAAGAGATTTTGGATTGGAAGCTTTACACAAATATCTTCAAGTTAAATCTGTTGTAACTCCCATTTACAATTCTCCTTGGCTTTGA 1509 0.4261 MANLSNGHPSSSSFKMPTIKFTKLFINGDFVDSISGKEFETIDPRTGEVIAKIAEGTKEDIDVAVRAARKAFDDGPWPRMPGAERAKIMMKWAELIDQNIEEIAALDAIDAGKLYHRLKAYEIPSAANTIRYYAGAADKIHGEVLKPSREFHAYTLMEPIGVVGHIIPWNFPSSMFVTKVGPSLAAGCTMVLKPAEQTPLSALFYAHLAKLAGIPDGVLSVVPGFGPTAGAAISSHMDIDKVSFTGSTEVGREVMAAAARSNLKPVSLELGGKSPLVIFDDAEVDKAVDLALLGAVYNKGEICVAGSRVFVQEGIYDEFEKKLVEKAKAWVVGDPFDAKVQQGPQVDKNQFEKILSYIEHGKREGATLLTGGNRVGNKGYYIEPTIFSNVKEDMLIAQDEIFGPVMALMKFKTIEEAIRSANNTKYGLAAGIVTKNLDIANTVSRSIRAGIIWINCYFIFGNDIPYGGYKMSGFGRDFGLEALHKYLQVKSVVTPIYNSPWL* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00175 502 FunFam Aldehyde dehydrogenase, putative 464 490 - -
Rops5g00175 502 Pfam Aldehyde dehydrogenase family 31 492 IPR015590 GO:0016491
Rops5g00175 502 SUPERFAMILY ALDH-like 14 498 IPR016161 GO:0016491
Rops5g00175 502 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 268 275 IPR029510 GO:0016491
Rops5g00175 502 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 13 492 - -
Rops5g00175 502 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 26 490 IPR016162 GO:0016491
Rops5g00175 502 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 296 307 IPR016160 GO:0016491
Rops5g00175 502 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 26 291 - -
Rops5g00175 502 FunFam Aldehyde dehydrogenase3 272 461 - -
Rops5g00175 502 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 272 461 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00175 Rops-Chr5 2709545 2713956 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00175 4 502 Aldehyde Dehydrogenase Gene Family AT3G24503 71.257 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00175 K12355 - gmx:100783920 893.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00265 2 4212218 4219897 Rops5g00175 5 2709545 2713956 PCT