Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00174 ATGACTGGTCTCTCCAATGGTCACGGTTCATCCTTTAAGCACCCCACCATCAAGTTCACCAAGCTCTTCATCAATGGAGAATTTGTTGATTCCATTTCAGGAAAGGAATTTGAGACCATAGACCCGAGAAATGGAGAGGTGATTGCGAAGATCGCAGAGGGAAGAAAAGAAGACATTGATGTTGCTGTGAAAGCGGCACGTGTCGCTTTTGATGATGGTCCATGGCCTCGTATGCCCGGTGCGGAAAGAGCACGAATTATGATGAAATGGGCTGATTTAATTGATCAAAACATTGAAGAAATAGCAGCATTAGATGCCATTGATGCTGGAAAGTTATACCATTGGTGCAAGGCTGTTGACATTCCTGGAGCAGCAAGCACTATACGCTATTATGCTGGTGCTGCTGATAAAATTCATGGAGAGGTATTAAAACATTCTAGGGAGTTTCATGCATATACTTTGCTGGAACCAATTGGTGTAGTAGGACATATTATTCCCTGGAATTTCCCTAGCACCATGTTTGTTGCCAAGGTTAGTCCTTCCTTGGCTGCTGGTTGCACCATGGTCCTCAAGCCTGCTGAACAAACACCTCTTTCGGCTTTGTTTTATGCTCATCTAGCCAAGCAGGCTGGAATTCCAGATGGAGTGCTCAATGTAGTACCCGGGTTTGGCCCAACTGCAGGTGCTGCAGTATGCTCACATATGGACATTGATAAGGTGAGCTTTACTGGTTCAACAGATGTAGGCCGTGAAGTAATGCAAGCTGCAGCCAGAAGTAATTTGAAACCAGTTTCACTTGAATTAGGAGGCAAGTCACCCCTTGTAATCTTTGATGATGCTGATGTTGATAAAGCTGCTGACCTTGCTCTCTTGGGCATCTTATTTAATAAGGGAGAAATTTGTGTTGCAGGTTCCCGTGTATTTGTTCAGGAAGGAATCTATGATGAATTTGAGAAGAAGTTGGTAGAGAAAGCAAAAGCTTGGGTTGTTGGTGATCCTTTTGATCCTAAAGTTCAACAAGGGCCTCAGGTTGACAAGAAGCAGTTTGAAAAAATTCTTTCCTATATTGAGCATGGAAAGAGAGAAGGGGCTACCCTTTTGACAGGAGGTAAAAGAGTAGGCAACAAGGGTTACTACATTGAGCCTACAATTTTCTCTAATGTTAAGGAGGACATGCTTATAGCACAAGATGAAATATTTGGCCCTGTGATGGCACTGATGAAGTTTGAGACTATAGAGGAAGCAATTAAGAGTGCCAATAATACAAGATATGGCTTAGCAGCAGGGATTGTGACCAAGAGTTTGGATATAGCAAACACTGTGTCAAGGTCTATTCGTGCAGGCATTGTTTGGATCAATTGTTACTTTGCCTTTGGGAATGACATTCCCTATGGAGGGTACAAGATGAGTGGATTTGGAAGAGATTTTGGATCGGAAGCTTTACACAAATATCTACAAGTTAAATCTGTTGTAACTCCCATTTACAATTCTCCTTGGCTTTGA 1503 0.4258 MTGLSNGHGSSFKHPTIKFTKLFINGEFVDSISGKEFETIDPRNGEVIAKIAEGRKEDIDVAVKAARVAFDDGPWPRMPGAERARIMMKWADLIDQNIEEIAALDAIDAGKLYHWCKAVDIPGAASTIRYYAGAADKIHGEVLKHSREFHAYTLLEPIGVVGHIIPWNFPSTMFVAKVSPSLAAGCTMVLKPAEQTPLSALFYAHLAKQAGIPDGVLNVVPGFGPTAGAAVCSHMDIDKVSFTGSTDVGREVMQAAARSNLKPVSLELGGKSPLVIFDDADVDKAADLALLGILFNKGEICVAGSRVFVQEGIYDEFEKKLVEKAKAWVVGDPFDPKVQQGPQVDKKQFEKILSYIEHGKREGATLLTGGKRVGNKGYYIEPTIFSNVKEDMLIAQDEIFGPVMALMKFETIEEAIKSANNTRYGLAAGIVTKSLDIANTVSRSIRAGIVWINCYFAFGNDIPYGGYKMSGFGRDFGSEALHKYLQVKSVVTPIYNSPWL* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00174 500 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 24 289 - -
Rops5g00174 500 SUPERFAMILY ALDH-like 14 496 IPR016161 GO:0016491
Rops5g00174 500 Pfam Aldehyde dehydrogenase family 29 490 IPR015590 GO:0016491
Rops5g00174 500 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 266 273 IPR029510 GO:0016491
Rops5g00174 500 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 270 459 IPR016163 GO:0016620
Rops5g00174 500 FunFam Aldehyde dehydrogenase, putative 462 488 - -
Rops5g00174 500 FunFam Aldehyde dehydrogenase3 270 459 - -
Rops5g00174 500 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 488 IPR016162 GO:0016491
Rops5g00174 500 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 13 490 - -
Rops5g00174 500 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 294 305 IPR016160 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00174 Rops-Chr5 2698384 2705084 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00174 2 500 Aldehyde Dehydrogenase Gene Family AT3G24503 72.200 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00174 K12355 - gmx:100783920 910.212