Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00159 ATGTCAACCGCCCCGGCACCCTCTTCGCCGCCGGCGGCCAACGCCACCGCTCCTCCGCCGTCAACCCCTGCTTCACCACCTCCGGCAACACCTTCCGCACCACCTCCGGCAACACCTTCCTCACCACCGCCTGCAACTCCTTCCTCACCACCGCCTGCAACTCCGTCGTCACCACCCCCTGCGACACCCTCTGCGCCTCCTCCGGCAACTCCCTCTACGCCGCCTGCAACTCCTTCGACGCCACCGGCGACCCCCTCTGCTCCTCCACCGTCCACCCCTTCACTTTCTCCGCCAGCACCCACCACGCCTTCAACCTCTCCGCCGTCTCCGTCGACCGGAGGGAACACTCCTAGTCCACCTTCCCGGAGCTCACCCCCTCCTCCGACCAGCACTCGAACACCGTCGCCACCGTCGTCAAAATCTCCTCCTTCGCCGCCGTCGTCATCGTCGAGTATTTCCACCGGCGTCGTCGTCGGAATCGCCGTTGGGGCGGTGGCGATTCTTGTGGTGTTGAGCATTCTGTGCTTGTGTTGTAGGAAGAAGAAGAGAAGACGTGATGAGGAATACTATGTTCCTCCACCACCACAACCACCAAGGGGACCTAAAGATGATCCATATGGTGGTGCTCAACATCATTGGCAGCATAATGCTCCACCTCCTTCAGATCATGTAGTTTCAATGATGCCTAAGCCATCACCACCTCCACCACCAGTTGCATCACGGCCGCCACCACCTCATCCACCGGTTTATGTCGCGCAGCCGCCACCTCCTTTCGTGAGCAGCAGTGGTTCTGGATCAAACTATTCAGGTGGAGAACCACTTCCACCTCCTTCTCCAGGCTATGCACTTGGCTTCTCAAAGAGCACATTTACATATGAGGAGTTAGCACGTGCAACTGATGGATTCTCTGATGCCAACCTTCTTGGACAAGGTGGATTTGGATATGTGCATAGAGGAATTCTCCCCAATGGTAAGGAAGTGGCAGTGAAGCAGCTAAAGGCTGGAAGTGGACAAGGGGAACGTGAATTTCAAGCTGAAGTTGAGATAATTAGCCGTGTTCATCATAAACATCTTGTTTCTTTGGTTGGATATTGCATCACTGGGTCCCACAGGCTGCTTGTTTATGAATTTGTTCCCAACAATACATTGGAATTCCATTTACATGGAAAAGGGAGACCTACCATGGATTGGCCCACAAGACTAAGAATTGCTTTAGGATCTGCAAAAGGACTGGCCTATCTACATGAAGATTGTCATCCCAAGATCATCCATCGTGATATCAAAGCTGCTAACATCCTTATTGATTTTAAGTTTGAAGCAAAGGTTGCAGATTTTGGTCTTGCAAAGTTTACTTCTGATGTCAATACTCATGTTTCTACTCGTGTGATGGGGACATTTGGGTATCTGGCTCCAGAATATGCATCTAGTGGCAAACTTTCAGATAAATCAGATGTTTTCTCCTACGGAGTCATGCTCCTTGAGTTAATAACTGGACGCCGGCCAGTTGATAAAACTCAAACTTTCATGGAGGATAGTTTGGTAGACTGGGCTAGGCCTTTGCTCACACGTGCTTTGGAAGATGATGATTTTGATTCTCTGATTGATCCGAGGCTCCAGAAGGAGTATGATCCTAATGAGATGGCTCGTATGGTGGCATGTGCTGCGGCTTGCACACGTCATTCAGCAAAACGTAGACCAAGGATGAGCCAGGTTGTCCGTGCTCTTGAAGGAGATGTGTCTCTAGCAGATCTTAATGAAGGAATCAAACCTGGACACAGCACTATGTATAGTTCTCATGAAAGCTCAGATTATGATACTGCACAATACAAGGAAGACATGAAAAAGTTCAGAAGAATGGCATTGGGAACTAAGGAGTATGGTGGCAGCAGTGAGTACAGTGCAGCTACAAGTGAGTATGGTTTAAACCCATCTGGCTCAAGCAGTGAAGCACCAAGCCGCTACACGACAAGGGAAATGGAAATGAGAATGATGAAGAACAGTCAAGGTTTCAGTGGAAGCTCTTGA 2025 0.5047 MSTAPAPSSPPAANATAPPPSTPASPPPATPSAPPPATPSSPPPATPSSPPPATPSSPPPATPSAPPPATPSTPPATPSTPPATPSAPPPSTPSLSPPAPTTPSTSPPSPSTGGNTPSPPSRSSPPPPTSTRTPSPPSSKSPPSPPSSSSSISTGVVVGIAVGAVAILVVLSILCLCCRKKKRRRDEEYYVPPPPQPPRGPKDDPYGGAQHHWQHNAPPPSDHVVSMMPKPSPPPPPVASRPPPPHPPVYVAQPPPPFVSSSGSGSNYSGGEPLPPPSPGYALGFSKSTFTYEELARATDGFSDANLLGQGGFGYVHRGILPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYCITGSHRLLVYEFVPNNTLEFHLHGKGRPTMDWPTRLRIALGSAKGLAYLHEDCHPKIIHRDIKAANILIDFKFEAKVADFGLAKFTSDVNTHVSTRVMGTFGYLAPEYASSGKLSDKSDVFSYGVMLLELITGRRPVDKTQTFMEDSLVDWARPLLTRALEDDDFDSLIDPRLQKEYDPNEMARMVACAAACTRHSAKRRPRMSQVVRALEGDVSLADLNEGIKPGHSTMYSSHESSDYDTAQYKEDMKKFRRMALGTKEYGGSSEYSAATSEYGLNPSGSSSEAPSRYTTREMEMRMMKNSQGFSGSS* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00159 674 SUPERFAMILY Protein kinase-like (PK-like) 278 575 IPR011009 -
Rops5g00159 674 MobiDBLite consensus disorder prediction 257 271 - -
Rops5g00159 674 Gene3D Phosphorylase Kinase; domain 1 282 377 - -
Rops5g00159 674 Pfam Protein tyrosine and serine/threonine kinase 307 575 IPR001245 GO:0004672|GO:0006468
Rops5g00159 674 SMART serkin_6 302 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00159 674 PRINTS Proline rich extensin signature 31 52 - -
Rops5g00159 674 PRINTS Proline rich extensin signature 52 68 - -
Rops5g00159 674 PRINTS Proline rich extensin signature 16 28 - -
Rops5g00159 674 FunFam proline-rich receptor-like protein kinase PERK1 280 377 - -
Rops5g00159 674 MobiDBLite consensus disorder prediction 224 255 - -
Rops5g00159 674 CDD STKc_IRAK 308 577 - -
Rops5g00159 674 MobiDBLite consensus disorder prediction 11 144 - -
Rops5g00159 674 MobiDBLite consensus disorder prediction 629 654 - -
Rops5g00159 674 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 163 633 IPR047117 -
Rops5g00159 674 ProSitePatterns Protein kinases ATP-binding region signature. 308 330 IPR017441 GO:0005524
Rops5g00159 674 ProSiteProfiles Protein kinase domain profile. 302 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00159 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 422 434 IPR008271 GO:0004672|GO:0006468
Rops5g00159 674 Gene3D Transferase(Phosphotransferase) domain 1 378 586 - -
Rops5g00159 674 MobiDBLite consensus disorder prediction 627 674 - -
Rops5g00159 674 MobiDBLite consensus disorder prediction 184 275 - -
Rops5g00159 674 MobiDBLite consensus disorder prediction 1 153 - -
Rops5g00159 674 FunFam Proline-rich receptor-like protein kinase PERK1 378 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00159 Rops-Chr5 2431455 2436083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00159 119 660 Trihelix Transcription Factor Family AT1G70460 49.724 6.60e-174 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Rops5g00159 PK_Tyr_Ser-Thr 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00159 - - gmx:100781944 843.188