Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00158 ATGATCACCACCACCCAATACCGGAGCACCTTCCTCTTCTCCCTCTTCCTTCTCTTCATCGCCATCTTCCAAACCCTAATAACCCCAAATCCGTCGCTATTCCCTCGCAACTACATCGTGGGGTTCCTCGAATACAAAAACGCCGAGCACCATCGTGATTACCTGGAATCGAACCTCCGCTCAAAAGGGTGGCGGTGGATCGAGCGGCGGAACCCGGCGGCGAAGTACCCCACCGATTTCGGGGTTATTTCGGTCGCCGAATTGGGGTTGGTCGATGAGATTCGAAAATTGGGGTTGGTGAAGTATGTGAGCCTGGATATGAGCTATAAGAGAGGTTTGATGAAGCATGAGAATGATAAATCTGGTTCCTTTGTTAATGGGAACAAACGACCCGGGAAGATCTTCACAAAGATGTCGTTTTGTGAAGCAGAAGAAGAAGAAGATACTAGTAATCGCAATAATTCAATCACGTGGGGGAGACAATTGTTGATGCAGAGATCACAAGTTACTTCCATGTTTGGGGCAGAAGATCTTTGGGCAAGAGGGTACACTGGTGCTAAGGTCAAGATGGCCATATTTGATACTGGCATTCGAGCTGATCACCCTCATTTCCATAACATAATGGAGCGTACAAATTGGACCAATGAGGATACATTGAATGACAATCTTGGACATGGGACTTTCGTTGCTGGTGTTATTGCTGGTGTGGATGTGGAGTGCCTTGGTTTTGCACCAGATACTGAGATTTATGCATTTCGAGTGTTCACTGATGCACAGGTGTCATATACATCATGGTTCCTTGATGCCTTCAACTATGCAATTGCAACCAATATGGATGTGCTAAATTTGAGCATAGGTGGACCTGATTACTTGGATCTCCCATTTGTGGAAAAGATATGGGAGATAACAGCAAATAACATAATCATGGTTTCTGCAATTGGAAATGATGGACCACTTTATGGAACTTTGAACAATCCAGCAGATCAAAGCGATGTCATTGGTGTTGGTGGTATTGACTATAGTGACCATATAGCCTCCTTTTCCTCACGAGGCATGAGTACCTGGGAACTTCCTCATGGTTATGGCCGTGTGAAGCCAGACATAGTTGCATATGGACGAGACATAATGGGATCAAAGATTAGTTCGGGTTGTAAAAGTTTATCAGGAACCAGTGTCGCAAGTCCTGTAGTTGCTGGTGTTGTGTGTTTGCTTGTTAGTGTCATTCCTGAACCTGATCGGAAGAAAATCTTAAACCCAGCAAGCATGAAACAGGCACTGGTTGAGGGTGCTGCAAAGCTGGCTGGGCCTAACATTTATGAGCAGGGTGCTGGCAGGGTTGATCTGTTAGAATCATATGAGATTCTTAAGAGCTACAAACCTAGGGCGAGCATCTTTCCCAGTGTTCTTGATTATACAGATTGTCCTTACACGTGGCCCTTTTGTCGTCAGCCACTCTATGCAGGTGCCATGCCTGTCATCTTCAACGCCACCATTTTGAATGGAATGGGTGTTATTGGCTATGTTGAAAGTCCACCAACATGGCATCCTTCTGAAGAAGAAGGGAATCTTCTAAGCATTCATTTTACATATTCTGATATCATCTGGCCTTGGACTGGTTATTTGGCCCTTCACATGCAAATCAAGGAAGAAGGTGCACAGTTTTCTGGAATGATTGAAGGTAACGTGACTTTGAAGGTTTCGAGTCCTCCAGCTCAAGGAGAGAAAGACCGTCGAATTAGCACCAGTGTGCTTCAATTAAAGTTAAAAGTGGTGCCAACACCACCACGATCAAAACGAGTTTTGTGGGATCAGTTTCACAATATCAAATACCCTCCAGGTTATATTCCCAGAGATTCCTTGGATGTTCGAAATGACATTCTTGACTGGCATGGTGATCATCTGCATACAAATTTTCACATCATGTTCAACATGTTACGAGATGCTGGTTACTTTGTTGAAACACTTGGTTCTCCTCTTACATGCTTTGATGCTCGACAGTATGGAACACTTCTGTTGGTGGATCTTGAGGATGAGTACTTCGCCGAGGAGATTGAAAAGCTAAGAGATGATGTTGTAAATACTGGATTGGGATTAGCTGTTTTTGCTGAGTGGTACAATGTTGATACCATGGTAAAGATGAGATTCTTTGATGACAATACTCGGAGCTGGTGGACCCCAGTCACTGGAGGCGCTAATATTCCTGCACTTAATGATCTTTTGGCTCCATTTGGAATTGCTTTTGGAGATAAGATTCTGAATGGCGATTTTTCACTTTTGAGTGAGCAGAATCGATATGCATCAGGAACAGATATAGTGAGGTTTCCAAGAGGTGGTTATGTACATAGCTTTCCTTTCTTTGACAGTTCAGAAAGTGGAGCCACTCAGAATGTGCTGACTTCTGGCACAACCAGGGCAGATTCTCCCATTCTTGGTCTTGCAAAAATGGGTGAAGGTCGCATAGCTGTGTATGGAGACTCCAACTGTTTGGACAGCAGCCATATGGTTACTAATTGTTTTGTGCTTCTAAGGAAAATACTTGATTTTACTAGTGAGGATGTTAGAGATGCAGTGCTTTTCTCTGATTCAAATAAACTAGATACTCCCTTGTATGAAGATGACAATCAGCTGCCATCGCGCAGAACCGATGTAAATTTCTCTGCATATTCAGCTGTTACAGGGAAGGAATTGATCTGCAGGACTGACACAAGGTTTGAAATATGGGGAACTAAAGGTTACAGTTTGCAAGTCAGAGGAAGAAACAGAAGATTGCCTGGTTATCCTGTTATTGATCTGGGAAATGGTTTCAATTCAACCTCTGATGCTTCTAACATTAGGCATCCCAAGTCAACACACAGAAATAAGGATGACTCTCTAGGGAACAGGTATTTGGGCCTGTTCTATGGGGATGAGCCTGATGCACCTGTATTGGTTGGTAGTCACTGGCTTGTTCCTGCTGTTATTGCAGCAACTGGTATTTTGCTGTTGAGTCTTTGGCGCGTTCGCCAAAAGAGACGTAGAAGAAGGAAAGGATCAAGCTCTGGTAGATTGGCTAATTTATAG 3060 0.4379 MITTTQYRSTFLFSLFLLFIAIFQTLITPNPSLFPRNYIVGFLEYKNAEHHRDYLESNLRSKGWRWIERRNPAAKYPTDFGVISVAELGLVDEIRKLGLVKYVSLDMSYKRGLMKHENDKSGSFVNGNKRPGKIFTKMSFCEAEEEEDTSNRNNSITWGRQLLMQRSQVTSMFGAEDLWARGYTGAKVKMAIFDTGIRADHPHFHNIMERTNWTNEDTLNDNLGHGTFVAGVIAGVDVECLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATNMDVLNLSIGGPDYLDLPFVEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYSDHIASFSSRGMSTWELPHGYGRVKPDIVAYGRDIMGSKISSGCKSLSGTSVASPVVAGVVCLLVSVIPEPDRKKILNPASMKQALVEGAAKLAGPNIYEQGAGRVDLLESYEILKSYKPRASIFPSVLDYTDCPYTWPFCRQPLYAGAMPVIFNATILNGMGVIGYVESPPTWHPSEEEGNLLSIHFTYSDIIWPWTGYLALHMQIKEEGAQFSGMIEGNVTLKVSSPPAQGEKDRRISTSVLQLKLKVVPTPPRSKRVLWDQFHNIKYPPGYIPRDSLDVRNDILDWHGDHLHTNFHIMFNMLRDAGYFVETLGSPLTCFDARQYGTLLLVDLEDEYFAEEIEKLRDDVVNTGLGLAVFAEWYNVDTMVKMRFFDDNTRSWWTPVTGGANIPALNDLLAPFGIAFGDKILNGDFSLLSEQNRYASGTDIVRFPRGGYVHSFPFFDSSESGATQNVLTSGTTRADSPILGLAKMGEGRIAVYGDSNCLDSSHMVTNCFVLLRKILDFTSEDVRDAVLFSDSNKLDTPLYEDDNQLPSRRTDVNFSAYSAVTGKELICRTDTRFEIWGTKGYSLQVRGRNRRLPGYPVIDLGNGFNSTSDASNIRHPKSTHRNKDDSLGNRYLGLFYGDEPDAPVLVGSHWLVPAVIAATGILLLSLWRVRQKRRRRRKGSSSGRLANL* 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00158 1019 PANTHER PEPTIDASE S8 33 439 - -
Rops5g00158 1019 ProSitePatterns Serine proteases, subtilase family, serine active site. 389 399 IPR023828 -
Rops5g00158 1019 ProSitePatterns Serine proteases, subtilase family, histidine active site. 225 235 IPR022398 -
Rops5g00158 1019 PRINTS Subtilisin serine protease family (S8) signature 388 404 IPR015500 -
Rops5g00158 1019 PRINTS Subtilisin serine protease family (S8) signature 185 204 IPR015500 -
Rops5g00158 1019 PRINTS Subtilisin serine protease family (S8) signature 221 234 IPR015500 -
Rops5g00158 1019 Gene3D Peptidase S8/S53 domain 163 453 IPR036852 GO:0004252|GO:0006508
Rops5g00158 1019 SUPERFAMILY Subtilisin-like 169 457 IPR036852 GO:0004252|GO:0006508
Rops5g00158 1019 CDD Peptidases_S8_SKI-1_like 179 435 IPR034185 -
Rops5g00158 1019 FunFam subtilisin-like protease SBT6.1 157 451 - -
Rops5g00158 1019 Pfam Subtilase family 186 436 IPR000209 GO:0006508|GO:0008236
Rops5g00158 1019 ProSiteProfiles Serine proteases, subtilase domain profile. 157 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00158 Rops-Chr5 2422761 2428980 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00158 259 1017 Subtilisin-like Serine Gene Family AT5G19660 78.590 0.0 1238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00158 K08653 - gmx:100819188 1801.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00158 5 2422761 2428980 Rops5g00158 5 2422761 2428980 ECH