Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00152 ATGATTTCATGGGTACTGAATGATAATGGTCAGCTGAAAGAAAAACAAGGTGGGACAAACAAGAATATCCCTCAGGACTCAGTCATGTATAGACCATTCATGACATGTGATGATCCAAAAGGAGTTGTTGAGTGTGGAGCTTTAAGGAAATACAGGACCGGTTCTTCTCAGAAAATGAAGGACAAAACAAAAAGCAAGAGGATGGCTGAAAATCTAGATACATCCTTGACAAACAAGCCAGACACAGAAGAGAAAAAAGTCTCAAAAGGGTCCATGGAAAGATCTTTTGATCCTTCAACCTTGCAGCTGGTGGAAGTATCTAGAGGGGCTCAAAGGTTGAACAACATGATTGAATCATGGTCTAAGGGTTTGAGGTGTGATGGAAGTTCTGAAGATATTGCAAAAGATTTGTTGAAAGGGGCTCTTGACTTGCAAGAATCTCTAGTAATGCTTCGGAAGGTGCAAGAAGCTTCACAATATATGGCTCGTTTGAAGCGAAAACAAAATGAGAAACTTGAAAGAAGCAGAATGGATGCAAAGGTTGTGGTTGATAGAACAACACATTCTAATCAATTTGGTGAACAAAGTTATCCAATGAGATTTCAAAGAGCTTGGCCTTATTCAGCTGATGGTTCTTCTTCAAGTAGTTGCAACGAGGAGCTTAAGAATGTGATTAAGGAGAGTATGGTTAGACAAAATCTATTGTCAAGCACAACCACTGAAGGATTGGATTCAGCATCAGCATTCCATTCTAGAAACTCAAGCCAATCTTCTGAAGTTTTTAATGACAGGCTTTCTGATTCTTCTTTGTCACCAATAACTTCAAGGAAGGAAAGAGGATCCAATTTGGTTGCCAAGTTGATGGGTTTAGAAGAAGTCCCTTCAACATCATTTCCAACTTTTATGCCAAAACAGATGGAGAGTCAAAAGATTCTGAATCAGAAGAGACCTATATTTGAGATAGACATGCCAAAGGTGAGAAAGAATAGTTTGGTAGTTGAGAAGGTTAAGCCACAACAACAGAAGACCCTGAGGGAAATTCTTGAGACTACTCATTTCAATGGACTTTTGAAGAAGAGTTCTGTCAGAGAGCCAAAGCTTCAGGTCCATCATTCCAATGATTCTCATCACCAACAGTTTGATGATTTACCTCCCATTGTACTTATGAAACCTAGATATACTCCATATCAGGAATTTGTGAAAACTTATGAGCCAGTTTCTCCAGAAGAGTTATCTCTTAGAAATCTAAAAGCAAAAGAAGTTCCTTCCAAAACTTTCAAACATAGAGAAGGTTCAACCACCAACATGGGAAAAGAAATGGAAGGACATGTATCCAAAAGGGTTATTACCAAAGAGGAAAGAACTAAGCACCACAAAGAGGTTGTGGAACTTGATGCAAAAGAAATCAAGCCTGTTGAAAGTGAGAAGGCTCCAGGATCAGGAGGTAAGGTAAAACTGCATAGTCATGCTAGTCACAAATCACAGGTAAGTGGAACATTTGATAAAAAAGCTAAGGTAAAGACCATTACCATTAGCAGAAAGCTACCAGAAAAGGAGGTACCAAAACCTAAAGTTGTGACAAAATATCAAGATCAAGGAGAAATCAGCTCTACAAGTACAAAGTTGAGGAAGCCACAAAGTGGATCCAGAATTGACAAGAATGAGGTTCCCTTCAGAAAGAGCACTACTTCAAATTCAAATACCATCTTAAAACCAAAGAATCAAAAAATCAATAATTCAGAACAGAGAAAGAATCAGATGAAGAAGCAAAGATCAGTTGCTGAGCCTGAAGCAGCTAAACCAGTTGATGAACAATTAGTAGAAGAAGAAGAAGAAAAGAGTACTGATGCTTCTTGTAAAGATGATTGCAATGAGATTAGAATAATCACTACAATAACAGATGATCTCAAGATGGAGCATGAAATAGATGCCAATGCAAATAAGATTAGAGAAAATTGTGAGCTTAGCCAGAGTTCTTCAGGTGATGATATTTTGATGCTGAAGTGTGAACATGAAAATGATACTATCCCTTCTGAGAAAGTTCAAGACAGCACCAATATCAGTGAAACCTTTTGCGAGCATGACAAAGACAGTGCTGAGCTGAAATATTTGCTTCTAACAAGTCAATCATTTATTAGCCATGCAGAAGAGTTCCTCAATCTTGATGTTGATTGTCCTAGGATCCTTCCAAAACATGAAACTAGCGGAATATCCAATCTCAGACTCTATTTGGATTGTGCAAATGAACTCACTGAGCGTAAAAGCCTTCAGGAATCACAAGTAGTTCACCCCTTATTGCTAACTTGTGGAAGGAATTCAAGATTGCCCATCTCTTTAGTCAGATTGGTTGAAGAAGTCTATAATGCCATTGAGAATCTGACATCTTATAGTGAAAATCCTGGGAAGAAACTTCCTTTGGATAATATCTATGCAATGATGGAGAGAGATATGAAGTGCAACAGTGGACTGATAAATGGAATATGGAACTGGGGTTGGAGGCATGGATTTTCTGTAGATGAAGCTGAGCAAGTTGTCAATGAAGTAGAAAATCTAGTTTTCAGTGGATTAATTGAGGAGGTAATTGTAAATTTATGA 2595 0.3807 MISWVLNDNGQLKEKQGGTNKNIPQDSVMYRPFMTCDDPKGVVECGALRKYRTGSSQKMKDKTKSKRMAENLDTSLTNKPDTEEKKVSKGSMERSFDPSTLQLVEVSRGAQRLNNMIESWSKGLRCDGSSEDIAKDLLKGALDLQESLVMLRKVQEASQYMARLKRKQNEKLERSRMDAKVVVDRTTHSNQFGEQSYPMRFQRAWPYSADGSSSSSCNEELKNVIKESMVRQNLLSSTTTEGLDSASAFHSRNSSQSSEVFNDRLSDSSLSPITSRKERGSNLVAKLMGLEEVPSTSFPTFMPKQMESQKILNQKRPIFEIDMPKVRKNSLVVEKVKPQQQKTLREILETTHFNGLLKKSSVREPKLQVHHSNDSHHQQFDDLPPIVLMKPRYTPYQEFVKTYEPVSPEELSLRNLKAKEVPSKTFKHREGSTTNMGKEMEGHVSKRVITKEERTKHHKEVVELDAKEIKPVESEKAPGSGGKVKLHSHASHKSQVSGTFDKKAKVKTITISRKLPEKEVPKPKVVTKYQDQGEISSTSTKLRKPQSGSRIDKNEVPFRKSTTSNSNTILKPKNQKINNSEQRKNQMKKQRSVAEPEAAKPVDEQLVEEEEEKSTDASCKDDCNEIRIITTITDDLKMEHEIDANANKIRENCELSQSSSGDDILMLKCEHENDTIPSEKVQDSTNISETFCEHDKDSAELKYLLLTSQSFISHAEEFLNLDVDCPRILPKHETSGISNLRLYLDCANELTERKSLQESQVVHPLLLTCGRNSRLPISLVRLVEEVYNAIENLTSYSENPGKKLPLDNIYAMMERDMKCNSGLINGIWNWGWRHGFSVDEAEQVVNEVENLVFSGLIEEVIVNL* 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00152 864 MobiDBLite consensus disorder prediction 241 275 - -
Rops5g00152 864 MobiDBLite consensus disorder prediction 1 26 - -
Rops5g00152 864 MobiDBLite consensus disorder prediction 77 92 - -
Rops5g00152 864 MobiDBLite consensus disorder prediction 521 618 - -
Rops5g00152 864 MobiDBLite consensus disorder prediction 472 500 - -
Rops5g00152 864 MobiDBLite consensus disorder prediction 530 545 - -
Rops5g00152 864 MobiDBLite consensus disorder prediction 582 618 - -
Rops5g00152 864 PANTHER OS01G0228800 PROTEIN-RELATED 22 863 - -
Rops5g00152 864 MobiDBLite consensus disorder prediction 54 69 - -
Rops5g00152 864 MobiDBLite consensus disorder prediction 422 443 - -
Rops5g00152 864 MobiDBLite consensus disorder prediction 53 96 - -
Rops5g00152 864 MobiDBLite consensus disorder prediction 558 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00152 Rops-Chr5 2353967 2357700 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00152 701 861 TRM (TON1 Recruiting Motif) Superfamily AT3G24630 34.524 8.18e-20 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00152 - - gmx:100797863 1144.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00152 5 2353967 2357700 Rops5g00152 5 2353967 2357700 ECH
Rops2g00283 2 4449006 4452151 Rops5g00152 5 2353967 2357700 PCT