Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops5g00125 | ATGGGTTGCATTTATTCAAGGGTTTGCATAGGTGACACTTGCAGAGGTTCAAGCATCAATGGTGACCCAATTGCAAGACAAGGTGGTGTAGGTGAAGTTTCTGTGTTCTCACCATCATCTTCTGATGTTGGAGAAGGTGAAATCAGAGACCAATTGAACCAATTAAGCTTAACAAGAGATTCAGAAGCAGGAATCAGAAGGTTAGCTAGGGTTTCAGCCCAGTTTCTTCCCCCAGATGGTTCAAGAGTAGTGAAGGTTCCTTCAAATAACTATGAATTGCGTTATTCTTTTTTGTCTCAAAGAGGTTACTACCCTGATGCACTTGATAAGGCTAATCAAGATAGTTTTTGCATTCACACCCCATTCGGGACTAATCCTAATGATCATTTCTTTGGAGTTTTTGATGGACATGGTGAATTTGGAGCACAGTGTTCACAGTTTGTGAAGCAAAAGTTATGTGAGAATTTGTTAAGGAACTCAAAGTTTCGTGTTGATGCTGTTGAGGCTTGTCATGCAGCTTTTTTAGCCACTAATTCTCAGTTAAATGCTGACGATGTTTTGGATGATAGTATGAGTGGAACTACTGCCATTACGGTTTTTATTAGAGGGAAGACTATGTATGTGGCTAATTCTGGTGATTCAAGGGCTGTGATTGCTGAAAAAAGAGGTAAGGATATTGTTGCAGTTGATTTATCTGTTGATCAGACACCTTTTAGGGCTGATGAGCTTGAAAGGGTGAAGCTTTGTGGTGCTAGGGTGCTTACTTTGGATCAGATTGAAGGGTTAAAGAATCCTGATATTCAGTGTTGGGGTACTGAAGAGGATGATGATGGTGACCCTCCTAGGTTGTGGGTTCCAAATGGGATGTACCCTGGTACTGCTTTCACAAGGAGCATAGGTGATTCTATTGCTGAGACTATTGGGGTTGTTGCTAACCCTGAGATTTTTGTCTTTGAGCTCACACAGAATCACCCTTTTTTTGTGCTTGCCAGTGATGGGGTGTTCGAGTTTCTTTCTAGCCAGACTGTGGTAGAAATGGTTGCAAAATTCAAAGATCCTCGTGATGCTTGTGCTGCAATAGTGGCAGAATCTTATCGACTGTGGCTACAATATGAAACTCGTACAGATGATATTACAATCATAATTGTACATATAAATGGGCTAACTGAACCTGCTGTTGGTCAGTCAGCAAGTTATGGTGATGTTTTACGAACCCCTGTGCCTCAATTTGTAGAGGTAACAGGTTCAGAATCTCCTTCCACCTTTGGATGGAATGCTAGGAACCATCGTGTAAGGCATGACTTGTCAAGGGCACGCCTCCGAGCACTTGAAAATTCCCTAGAGAATGGGCAAGCTTGGGTTCCTCCATCTTCAGCTCACAGGAAGACATGGGAGGAAGAAGCACACATAGAGCAGGCATTGCATGATCATTTTCTCTTCCGAAAACTTACTGATTCTCAGTGTCATGTTTTATTGGATTGCATGCAAAGAGTTGAAGTCCAACCCGGGGATATTATAGTCAAACAGGGTGGTGAAGGTGACTGTTTTTATGTTGTTGGTTGTGGAGAATTTGAGGTCTTGGCGACTCAGGAAGAAAAAGATGGGGAGATACCTAGGGTTTTGCAGCGCTACACAGCTGAAAAACTATCATGCTTCGGAGAACTTGCTCTAATGTACAATAAACCACTTCAGGCTTCTGTACGTGCTGTAACAAAAGGAACTCTTTGGGCTTTAAAACGAGAAGATTTTCGAGGGATTTTAATGTCAGAATTCTCTAACTTGTCATCCTTGAAGTTGCTTCGGTCTGTAGATCTGCTCTCAAGGTTATCAATTTTACAACTGAGTCAGATTTCTGACTCCCTTTCTGAAGCTTCCTTCTCAAGTGGGCAGACAATAATTGATAAAGATGAAGTCCATGCATTATACATTATCCAGAAGGGACGCGTGAAAATCACTTTTGATGCTGATTTATTGATAAGTCCAAATGCCAGCAGCCTGAAGTCTGACATTGAAAATGAGGATGATGATGCACAGAGCAGAAGTGAACTGTCAATAGAGAAGCCCCAGGGAAGCTATTTTGGTGAATGGGCCCTTCTTGGTGAACATATTGGTTCCTTAAGTGCTGTTGCTGTGGATGATGTTGTATGTGCTTTACTAACAAAGGACAAATTTGAATCAGTTATTGGCTCCTTACAAAAGATTCCTCAGGAAGATCACAAGTTGAGGGGTAATTCCAAGGAATTGACTAGAAACTTTGAATTTTCATCCCTTGATAAAGTCCAGCTCTCGGATTTGGAGTGGAGGAAGACCCTATATTCCACTGACTGCTCTGAGATTGGGCTTGCAAATTTAAGAGACTCAGAAAATGTGCTTACTTTGAAGAGATTTTCTAAGCCAAAGGTGAAAAGGCTAGGAAAGGAATCCCAAGTCTTGAAAGAGAAAGATTTGATTAAGGGTATGAGCTCTTCAGCTTGTATACCACAGGTTTTATGCACTTCTGCTGACCGTATATATGCTGGAATACTGCTGAATACATGCCTCGTTTGCCCTTTGTCTTCCATACTTTCAAGTCCTTTTAGTGAATCAGCAGCATGCTTTTGTGCTGCTTCTGTTGTTACTGCCTTAGAAGACTTGCACAAGAATGGTGTTCTCTACAGAGGTGTGTCACCTGATGTTTTGATGTTGGACAAAACAGGGCAGATACAGCTGGTGGACTTCAGATTTGGAAAGAAGCTCTCTGATGAGAGAACATACACCATTTGTGGGATGGCAGATTCACTAGCTCCGGAGATTGTTTTGGGAAAAGGCCATGGTTTCCCTGCCGATTGGTGGGCATTAGGAGTTTTAATATATTTTATGTTAAGGGGTGAGATGCCATTTGGATCATGGAGAGAAAATGAACTTGATACAGTTGCCAAAATTGCGAAAAGGAAGCTAAATCTTCCAGAGACTTTTAGCCCTGAAGCTGTTGATCTCATCTCCAAGTTACTTGAAGCAGAAGAAAACTCTAGACTTGGTAGCCAAGGTACTGATTCTGTCAAGAGTCACCCATGGTTTAACGGTATTGAATGGGAAGGGATAAGACACCACACTTTTCCTGTTCCTCCAGAAATCACTTCCCGTATAACACAATACTTGGAAGCTCATTCTGAGGATTGTATTGGTTCTCTGGGGTCCCCATTACATGAGGTAGAAGAACTTAATGTGCCTGAATGGCTTGAGGACTGGTAG | 3231 | 0.4191 | MGCIYSRVCIGDTCRGSSINGDPIARQGGVGEVSVFSPSSSDVGEGEIRDQLNQLSLTRDSEAGIRRLARVSAQFLPPDGSRVVKVPSNNYELRYSFLSQRGYYPDALDKANQDSFCIHTPFGTNPNDHFFGVFDGHGEFGAQCSQFVKQKLCENLLRNSKFRVDAVEACHAAFLATNSQLNADDVLDDSMSGTTAITVFIRGKTMYVANSGDSRAVIAEKRGKDIVAVDLSVDQTPFRADELERVKLCGARVLTLDQIEGLKNPDIQCWGTEEDDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIFVFELTQNHPFFVLASDGVFEFLSSQTVVEMVAKFKDPRDACAAIVAESYRLWLQYETRTDDITIIIVHINGLTEPAVGQSASYGDVLRTPVPQFVEVTGSESPSTFGWNARNHRVRHDLSRARLRALENSLENGQAWVPPSSAHRKTWEEEAHIEQALHDHFLFRKLTDSQCHVLLDCMQRVEVQPGDIIVKQGGEGDCFYVVGCGEFEVLATQEEKDGEIPRVLQRYTAEKLSCFGELALMYNKPLQASVRAVTKGTLWALKREDFRGILMSEFSNLSSLKLLRSVDLLSRLSILQLSQISDSLSEASFSSGQTIIDKDEVHALYIIQKGRVKITFDADLLISPNASSLKSDIENEDDDAQSRSELSIEKPQGSYFGEWALLGEHIGSLSAVAVDDVVCALLTKDKFESVIGSLQKIPQEDHKLRGNSKELTRNFEFSSLDKVQLSDLEWRKTLYSTDCSEIGLANLRDSENVLTLKRFSKPKVKRLGKESQVLKEKDLIKGMSSSACIPQVLCTSADRIYAGILLNTCLVCPLSSILSSPFSESAACFCAASVVTALEDLHKNGVLYRGVSPDVLMLDKTGQIQLVDFRFGKKLSDERTYTICGMADSLAPEIVLGKGHGFPADWWALGVLIYFMLRGEMPFGSWRENELDTVAKIAKRKLNLPETFSPEAVDLISKLLEAEENSRLGSQGTDSVKSHPWFNGIEWEGIRHHTFPVPPEITSRITQYLEAHSEDCIGSLGSPLHEVEELNVPEWLEDW* | 1077 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops5g00125 | 1076 | Gene3D | - | 83 | 386 | IPR036457 | - | |
Rops5g00125 | 1076 | CDD | CAP_ED | 605 | 741 | IPR000595 | - | |
Rops5g00125 | 1076 | Gene3D | Transferase(Phosphotransferase) domain 1 | 850 | 1037 | - | - | |
Rops5g00125 | 1076 | CDD | PP2Cc | 110 | 385 | IPR001932 | - | |
Rops5g00125 | 1076 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 605 | 729 | IPR000595 | - | |
Rops5g00125 | 1076 | SUPERFAMILY | Protein kinase-like (PK-like) | 756 | 1045 | IPR011009 | - | |
Rops5g00125 | 1076 | SMART | PP2C_4 | 86 | 383 | IPR001932 | - | |
Rops5g00125 | 1076 | FunFam | Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein | 595 | 744 | - | - | |
Rops5g00125 | 1076 | CDD | CAP_ED | 479 | 588 | IPR000595 | - | |
Rops5g00125 | 1076 | Gene3D | Jelly Rolls | 452 | 595 | IPR014710 | - | |
Rops5g00125 | 1076 | SUPERFAMILY | cAMP-binding domain-like | 444 | 589 | IPR018490 | - | |
Rops5g00125 | 1076 | PANTHER | CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE | 461 | 1040 | - | - | |
Rops5g00125 | 1076 | Pfam | Protein phosphatase 2C | 121 | 364 | IPR001932 | - | |
Rops5g00125 | 1076 | ProSiteProfiles | PPM-type phosphatase domain profile. | 94 | 385 | IPR001932 | - | |
Rops5g00125 | 1076 | FunFam | Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein | 89 | 387 | - | - | |
Rops5g00125 | 1076 | PRINTS | cAMP-dependent protein kinase signature | 550 | 559 | - | - | |
Rops5g00125 | 1076 | PRINTS | cAMP-dependent protein kinase signature | 724 | 736 | - | - | |
Rops5g00125 | 1076 | PRINTS | cAMP-dependent protein kinase signature | 515 | 529 | - | - | |
Rops5g00125 | 1076 | PRINTS | cAMP-dependent protein kinase signature | 500 | 514 | - | - | |
Rops5g00125 | 1076 | SMART | serkin_6 | 773 | 1019 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops5g00125 | 1076 | Pfam | Protein kinase domain | 783 | 1019 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops5g00125 | 1076 | SUPERFAMILY | cAMP-binding domain-like | 597 | 731 | IPR018490 | - | |
Rops5g00125 | 1076 | FunFam | Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein | 453 | 593 | - | - | |
Rops5g00125 | 1076 | SUPERFAMILY | PP2C-like | 82 | 387 | IPR036457 | - | |
Rops5g00125 | 1076 | ProSiteProfiles | Protein kinase domain profile. | 765 | 1019 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops5g00125 | 1076 | Gene3D | Jelly Rolls | 596 | 747 | IPR014710 | - | |
Rops5g00125 | 1076 | SMART | cnmp_10 | 605 | 743 | IPR000595 | - | |
Rops5g00125 | 1076 | SMART | cnmp_10 | 479 | 602 | IPR000595 | - | |
Rops5g00125 | 1076 | Pfam | Cyclic nucleotide-binding domain | 498 | 589 | IPR000595 | - | |
Rops5g00125 | 1076 | Pfam | Cyclic nucleotide-binding domain | 625 | 728 | IPR000595 | - | |
Rops5g00125 | 1076 | ProSitePatterns | PPM-type phosphatase domain signature. | 130 | 138 | IPR000222 | GO:0043169 | |
Rops5g00125 | 1076 | Gene3D | Phosphorylase Kinase; domain 1 | 763 | 1040 | - | - | |
Rops5g00125 | 1076 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 479 | 588 | IPR000595 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops5g00125 | Rops-Chr5 | 2087585 | 2096170 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops5g00125 | 1 | 1076 | PP2C-type Phosphatase Gene Family | AT2G20050 | 68.339 | 0.0 | 1498 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | AGC_PKA-PKG | Rops5g00125 | Pkinase | 3.6e-32 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops5g00125 | - | - | gmx:100799821 | 1894.01 |