Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00125 ATGGGTTGCATTTATTCAAGGGTTTGCATAGGTGACACTTGCAGAGGTTCAAGCATCAATGGTGACCCAATTGCAAGACAAGGTGGTGTAGGTGAAGTTTCTGTGTTCTCACCATCATCTTCTGATGTTGGAGAAGGTGAAATCAGAGACCAATTGAACCAATTAAGCTTAACAAGAGATTCAGAAGCAGGAATCAGAAGGTTAGCTAGGGTTTCAGCCCAGTTTCTTCCCCCAGATGGTTCAAGAGTAGTGAAGGTTCCTTCAAATAACTATGAATTGCGTTATTCTTTTTTGTCTCAAAGAGGTTACTACCCTGATGCACTTGATAAGGCTAATCAAGATAGTTTTTGCATTCACACCCCATTCGGGACTAATCCTAATGATCATTTCTTTGGAGTTTTTGATGGACATGGTGAATTTGGAGCACAGTGTTCACAGTTTGTGAAGCAAAAGTTATGTGAGAATTTGTTAAGGAACTCAAAGTTTCGTGTTGATGCTGTTGAGGCTTGTCATGCAGCTTTTTTAGCCACTAATTCTCAGTTAAATGCTGACGATGTTTTGGATGATAGTATGAGTGGAACTACTGCCATTACGGTTTTTATTAGAGGGAAGACTATGTATGTGGCTAATTCTGGTGATTCAAGGGCTGTGATTGCTGAAAAAAGAGGTAAGGATATTGTTGCAGTTGATTTATCTGTTGATCAGACACCTTTTAGGGCTGATGAGCTTGAAAGGGTGAAGCTTTGTGGTGCTAGGGTGCTTACTTTGGATCAGATTGAAGGGTTAAAGAATCCTGATATTCAGTGTTGGGGTACTGAAGAGGATGATGATGGTGACCCTCCTAGGTTGTGGGTTCCAAATGGGATGTACCCTGGTACTGCTTTCACAAGGAGCATAGGTGATTCTATTGCTGAGACTATTGGGGTTGTTGCTAACCCTGAGATTTTTGTCTTTGAGCTCACACAGAATCACCCTTTTTTTGTGCTTGCCAGTGATGGGGTGTTCGAGTTTCTTTCTAGCCAGACTGTGGTAGAAATGGTTGCAAAATTCAAAGATCCTCGTGATGCTTGTGCTGCAATAGTGGCAGAATCTTATCGACTGTGGCTACAATATGAAACTCGTACAGATGATATTACAATCATAATTGTACATATAAATGGGCTAACTGAACCTGCTGTTGGTCAGTCAGCAAGTTATGGTGATGTTTTACGAACCCCTGTGCCTCAATTTGTAGAGGTAACAGGTTCAGAATCTCCTTCCACCTTTGGATGGAATGCTAGGAACCATCGTGTAAGGCATGACTTGTCAAGGGCACGCCTCCGAGCACTTGAAAATTCCCTAGAGAATGGGCAAGCTTGGGTTCCTCCATCTTCAGCTCACAGGAAGACATGGGAGGAAGAAGCACACATAGAGCAGGCATTGCATGATCATTTTCTCTTCCGAAAACTTACTGATTCTCAGTGTCATGTTTTATTGGATTGCATGCAAAGAGTTGAAGTCCAACCCGGGGATATTATAGTCAAACAGGGTGGTGAAGGTGACTGTTTTTATGTTGTTGGTTGTGGAGAATTTGAGGTCTTGGCGACTCAGGAAGAAAAAGATGGGGAGATACCTAGGGTTTTGCAGCGCTACACAGCTGAAAAACTATCATGCTTCGGAGAACTTGCTCTAATGTACAATAAACCACTTCAGGCTTCTGTACGTGCTGTAACAAAAGGAACTCTTTGGGCTTTAAAACGAGAAGATTTTCGAGGGATTTTAATGTCAGAATTCTCTAACTTGTCATCCTTGAAGTTGCTTCGGTCTGTAGATCTGCTCTCAAGGTTATCAATTTTACAACTGAGTCAGATTTCTGACTCCCTTTCTGAAGCTTCCTTCTCAAGTGGGCAGACAATAATTGATAAAGATGAAGTCCATGCATTATACATTATCCAGAAGGGACGCGTGAAAATCACTTTTGATGCTGATTTATTGATAAGTCCAAATGCCAGCAGCCTGAAGTCTGACATTGAAAATGAGGATGATGATGCACAGAGCAGAAGTGAACTGTCAATAGAGAAGCCCCAGGGAAGCTATTTTGGTGAATGGGCCCTTCTTGGTGAACATATTGGTTCCTTAAGTGCTGTTGCTGTGGATGATGTTGTATGTGCTTTACTAACAAAGGACAAATTTGAATCAGTTATTGGCTCCTTACAAAAGATTCCTCAGGAAGATCACAAGTTGAGGGGTAATTCCAAGGAATTGACTAGAAACTTTGAATTTTCATCCCTTGATAAAGTCCAGCTCTCGGATTTGGAGTGGAGGAAGACCCTATATTCCACTGACTGCTCTGAGATTGGGCTTGCAAATTTAAGAGACTCAGAAAATGTGCTTACTTTGAAGAGATTTTCTAAGCCAAAGGTGAAAAGGCTAGGAAAGGAATCCCAAGTCTTGAAAGAGAAAGATTTGATTAAGGGTATGAGCTCTTCAGCTTGTATACCACAGGTTTTATGCACTTCTGCTGACCGTATATATGCTGGAATACTGCTGAATACATGCCTCGTTTGCCCTTTGTCTTCCATACTTTCAAGTCCTTTTAGTGAATCAGCAGCATGCTTTTGTGCTGCTTCTGTTGTTACTGCCTTAGAAGACTTGCACAAGAATGGTGTTCTCTACAGAGGTGTGTCACCTGATGTTTTGATGTTGGACAAAACAGGGCAGATACAGCTGGTGGACTTCAGATTTGGAAAGAAGCTCTCTGATGAGAGAACATACACCATTTGTGGGATGGCAGATTCACTAGCTCCGGAGATTGTTTTGGGAAAAGGCCATGGTTTCCCTGCCGATTGGTGGGCATTAGGAGTTTTAATATATTTTATGTTAAGGGGTGAGATGCCATTTGGATCATGGAGAGAAAATGAACTTGATACAGTTGCCAAAATTGCGAAAAGGAAGCTAAATCTTCCAGAGACTTTTAGCCCTGAAGCTGTTGATCTCATCTCCAAGTTACTTGAAGCAGAAGAAAACTCTAGACTTGGTAGCCAAGGTACTGATTCTGTCAAGAGTCACCCATGGTTTAACGGTATTGAATGGGAAGGGATAAGACACCACACTTTTCCTGTTCCTCCAGAAATCACTTCCCGTATAACACAATACTTGGAAGCTCATTCTGAGGATTGTATTGGTTCTCTGGGGTCCCCATTACATGAGGTAGAAGAACTTAATGTGCCTGAATGGCTTGAGGACTGGTAG 3231 0.4191 MGCIYSRVCIGDTCRGSSINGDPIARQGGVGEVSVFSPSSSDVGEGEIRDQLNQLSLTRDSEAGIRRLARVSAQFLPPDGSRVVKVPSNNYELRYSFLSQRGYYPDALDKANQDSFCIHTPFGTNPNDHFFGVFDGHGEFGAQCSQFVKQKLCENLLRNSKFRVDAVEACHAAFLATNSQLNADDVLDDSMSGTTAITVFIRGKTMYVANSGDSRAVIAEKRGKDIVAVDLSVDQTPFRADELERVKLCGARVLTLDQIEGLKNPDIQCWGTEEDDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIFVFELTQNHPFFVLASDGVFEFLSSQTVVEMVAKFKDPRDACAAIVAESYRLWLQYETRTDDITIIIVHINGLTEPAVGQSASYGDVLRTPVPQFVEVTGSESPSTFGWNARNHRVRHDLSRARLRALENSLENGQAWVPPSSAHRKTWEEEAHIEQALHDHFLFRKLTDSQCHVLLDCMQRVEVQPGDIIVKQGGEGDCFYVVGCGEFEVLATQEEKDGEIPRVLQRYTAEKLSCFGELALMYNKPLQASVRAVTKGTLWALKREDFRGILMSEFSNLSSLKLLRSVDLLSRLSILQLSQISDSLSEASFSSGQTIIDKDEVHALYIIQKGRVKITFDADLLISPNASSLKSDIENEDDDAQSRSELSIEKPQGSYFGEWALLGEHIGSLSAVAVDDVVCALLTKDKFESVIGSLQKIPQEDHKLRGNSKELTRNFEFSSLDKVQLSDLEWRKTLYSTDCSEIGLANLRDSENVLTLKRFSKPKVKRLGKESQVLKEKDLIKGMSSSACIPQVLCTSADRIYAGILLNTCLVCPLSSILSSPFSESAACFCAASVVTALEDLHKNGVLYRGVSPDVLMLDKTGQIQLVDFRFGKKLSDERTYTICGMADSLAPEIVLGKGHGFPADWWALGVLIYFMLRGEMPFGSWRENELDTVAKIAKRKLNLPETFSPEAVDLISKLLEAEENSRLGSQGTDSVKSHPWFNGIEWEGIRHHTFPVPPEITSRITQYLEAHSEDCIGSLGSPLHEVEELNVPEWLEDW* 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00125 1076 Gene3D - 83 386 IPR036457 -
Rops5g00125 1076 CDD CAP_ED 605 741 IPR000595 -
Rops5g00125 1076 Gene3D Transferase(Phosphotransferase) domain 1 850 1037 - -
Rops5g00125 1076 CDD PP2Cc 110 385 IPR001932 -
Rops5g00125 1076 ProSiteProfiles cAMP/cGMP binding motif profile. 605 729 IPR000595 -
Rops5g00125 1076 SUPERFAMILY Protein kinase-like (PK-like) 756 1045 IPR011009 -
Rops5g00125 1076 SMART PP2C_4 86 383 IPR001932 -
Rops5g00125 1076 FunFam Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 595 744 - -
Rops5g00125 1076 CDD CAP_ED 479 588 IPR000595 -
Rops5g00125 1076 Gene3D Jelly Rolls 452 595 IPR014710 -
Rops5g00125 1076 SUPERFAMILY cAMP-binding domain-like 444 589 IPR018490 -
Rops5g00125 1076 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 461 1040 - -
Rops5g00125 1076 Pfam Protein phosphatase 2C 121 364 IPR001932 -
Rops5g00125 1076 ProSiteProfiles PPM-type phosphatase domain profile. 94 385 IPR001932 -
Rops5g00125 1076 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 89 387 - -
Rops5g00125 1076 PRINTS cAMP-dependent protein kinase signature 550 559 - -
Rops5g00125 1076 PRINTS cAMP-dependent protein kinase signature 724 736 - -
Rops5g00125 1076 PRINTS cAMP-dependent protein kinase signature 515 529 - -
Rops5g00125 1076 PRINTS cAMP-dependent protein kinase signature 500 514 - -
Rops5g00125 1076 SMART serkin_6 773 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00125 1076 Pfam Protein kinase domain 783 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00125 1076 SUPERFAMILY cAMP-binding domain-like 597 731 IPR018490 -
Rops5g00125 1076 FunFam Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 453 593 - -
Rops5g00125 1076 SUPERFAMILY PP2C-like 82 387 IPR036457 -
Rops5g00125 1076 ProSiteProfiles Protein kinase domain profile. 765 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00125 1076 Gene3D Jelly Rolls 596 747 IPR014710 -
Rops5g00125 1076 SMART cnmp_10 605 743 IPR000595 -
Rops5g00125 1076 SMART cnmp_10 479 602 IPR000595 -
Rops5g00125 1076 Pfam Cyclic nucleotide-binding domain 498 589 IPR000595 -
Rops5g00125 1076 Pfam Cyclic nucleotide-binding domain 625 728 IPR000595 -
Rops5g00125 1076 ProSitePatterns PPM-type phosphatase domain signature. 130 138 IPR000222 GO:0043169
Rops5g00125 1076 Gene3D Phosphorylase Kinase; domain 1 763 1040 - -
Rops5g00125 1076 ProSiteProfiles cAMP/cGMP binding motif profile. 479 588 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00125 Rops-Chr5 2087585 2096170 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00125 1 1076 PP2C-type Phosphatase Gene Family AT2G20050 68.339 0.0 1498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PKA-PKG Rops5g00125 Pkinase 3.6e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00125 - - gmx:100799821 1894.01