Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00120 ATGGTGATTTCCGGCAAAGGGTTTTATCGTCCCGTAAGGTCGGAAAGAAAAGGTGGTGGAAGCCGCTTCCACGACCGCAAGCAACATCCCAAGCTTCTCTCTGGCACCCTTCATCTCTCTGTTTCCTACATTGATAGGTTCCTATTTGCTAACCGTGTCAGTAAGGCAAGGCTTCAGTTGCTGGGTGTTTCAGCCATGTTCATTGCATCCAAGTATGAAGAAATTAACCCACCCCACGTGGAAGAGTTCTGTTTCATTACTAATAACACATACAACAAGGCAGAGGTTGTAAGGATGGAAGCTAACCCTTCCTTGGGTCATTACTTTACACGTATAAATTCTGAATGGAGAGAAGGATATAAGGTTCGAACCACTAACACAGGGCGTTATGTATCTGATCCAGTACTCTCTCATGCGGCTCGTGTGCACCCGTGGTCCCTCATGCAGCTTGTGTTGCACCCGCGGCTAGCCAAGATGCAGCGTTAG 486 0.4774 MVISGKGFYRPVRSERKGGGSRFHDRKQHPKLLSGTLHLSVSYIDRFLFANRVSKARLQLLGVSAMFIASKYEEINPPHVEEFCFITNNTYNKAEVVRMEANPSLGHYFTRINSEWREGYKVRTTNTGRYVSDPVLSHAARVHPWSLMQLVLHPRLAKMQR* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00120 161 Gene3D - 28 101 - -
Rops5g00120 161 SMART cyclin_7 21 105 IPR013763 -
Rops5g00120 161 SUPERFAMILY Cyclin-like 29 101 IPR036915 -
Rops5g00120 161 FunFam G2/mitotic-specific cyclin 24 105 - -
Rops5g00120 161 Pfam Cyclin, N-terminal domain 29 101 IPR006671 -
Rops5g00120 161 PANTHER CYCLINS 31 101 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00120 Rops-Chr5 1987353 1988223 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00120 31 109 Core Cell Cycle Gene Families AT5G43080 64.557 9.59e-31 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00120 K06627 - gmx:100776007 112.464