Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00107 ATGGAGAGTACACTTAAGGTCTTGAGAGATGGTGAATCAGTGCTTGATCTCAGCCCAAGATCCGCCGTTAGTGGTGGTGTTGAGGACATTTATGGTGAGGAACGTGCCACTGAGGACCAACTTGTCATTCCACGGAGTTTCTCAGTTGCCAGTGGGTACTCTTTGTTGAGGGATCCACAATACAACAAAGGACTTGCTTTCACTGAGAAAGAGAGAGATGCACACTATTTGCGTGGACTATTACCTCCTACAGTTATCTCCCAACAAATTCAGGAGAAGCAGCTGATAAACAACATCCGACAATATCAGGTTCCCTTGCAAAAGTACATGGCTATGCTGGAACTTCAGGCAAGCTTTTTCAACTCATCATTACACAGCATGAGATTGTTTCTGGTTAAGTTTTTCTTGTTCATGAAATTGGAAAGTAAAATAGCATATTATGCTGGTCCACAGGAAACAAATGAAAGGCTGTTTTACAAACTTCTTGTTGATAATGTTGAGGAACTGCTCCCAATTGTGTATACTCCTACTGTTGGTGAGGCTTGCCAGAAATATGGGAGCATCTTCAAACGTCCTCAGGGTCTTTACATAAGTTTGAAAGAGAAGGGGAAGATCCTTGAGGTGTTAAAAAACTGGCCTGAGAGGAATATTCAAGTTATTGTTGTAACAGATGGTGAAAGGATTTTGGGACTTGGGGATCTAGGGTGTCAGGGTATGGGAATTCCTGTTGGTAAGTTAGCATTGTACACCGCACTAGGAGGAGTTCGTCCATCAGCATGTTTGCCCGTTACAATTGATGTGGGGACAAATAATGAGCAATTACTGAATGATGAGTTTTACATTGGGCTTAGACAGAAAAGGGCAACTGGGCAGGAATATTCTGAACTTCTGCATGAGTTCATGACTGCTGTCAAGCGAAATTATGGAGAAAAAGTTGTTGTACAGTTTGAAGATTTTGCAAATCACAATGCTTTTGAGTTGCTTGCAAAATATGGGACAACTCATCTGGTTTTCAATGATGATATACAGGGAACTGCATCTGTTGTTCTTGCTGGGGTTGTAGCAGCCTTGAAGCTCATTGGGGGTACTTTGGCTGAGCACACATTCCTGTTCCTTGGTGCTGGAGAGGCAGGAACTGGAATAGCAGAACTAATAGCTCTTGAGATGTCCAAGCAGACAAAGACACCTGTAGAGGAGAATCGCAAGAAGATATGGCTTGTAGACTCAAAGGGTTTAATTGTTAGTTCGAGAAAGAATTCACTTCAACACTTCAAGAAGCCTTGGGCTCATGAACATGAGTCTGTTGACAATCTCTTAGATGCTGTTAAGGTAATCAAGCCTACAGTTTTGATTGGATCATCAGGAGTGGGAAAAACATTCACAAAGGAAGTTGTTGAGGCTTTGGCTTCAATCAATGATAAACCTCTCATTCTGGCCCTCTCCAATCCAACTTCACAGTCTGAGTGTACAGCTGAAGAGGCTTTCCAGTGGAGTGAGGGTCGTGCGGTTTTTGCTAGCGGGAGTCCATTTGATCCTATTGAATACAAGGGCAAAGTTTACTATTCTGGCCAGTCCAACAATGCTTACATTTTCCCTGGCTTTGGTTTGGGTTTGGTAATCTCAGGAGCAATCCGAGTACATGATGATATGCTTCTGGCAGCCTCTGAAGCCTTGGCTAAACAAGTGACAGATGAGAACTACAAAAAGGGCTTGATTTACCCACCATTCTCTAACATCAGAAAAATTTCAGCTAACATAGCAGCAAATGTTGCTGCCAAGGCATATGAACTAGGCTTGGCTACACATCTCCCTCGTCCTCAGAATCTTGTGAAGTATGCTGAGAGCTGCATGTATACCCCAATCTACCGAAACTATAGGTGA 1881 0.429 MESTLKVLRDGESVLDLSPRSAVSGGVEDIYGEERATEDQLVIPRSFSVASGYSLLRDPQYNKGLAFTEKERDAHYLRGLLPPTVISQQIQEKQLINNIRQYQVPLQKYMAMLELQASFFNSSLHSMRLFLVKFFLFMKLESKIAYYAGPQETNERLFYKLLVDNVEELLPIVYTPTVGEACQKYGSIFKRPQGLYISLKEKGKILEVLKNWPERNIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVRPSACLPVTIDVGTNNEQLLNDEFYIGLRQKRATGQEYSELLHEFMTAVKRNYGEKVVVQFEDFANHNAFELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHTFLFLGAGEAGTGIAELIALEMSKQTKTPVEENRKKIWLVDSKGLIVSSRKNSLQHFKKPWAHEHESVDNLLDAVKVIKPTVLIGSSGVGKTFTKEVVEALASINDKPLILALSNPTSQSECTAEEAFQWSEGRAVFASGSPFDPIEYKGKVYYSGQSNNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTDENYKKGLIYPPFSNIRKISANIAANVAAKAYELGLATHLPRPQNLVKYAESCMYTPIYRNYR* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00107 626 PIRSF ME 30 129 IPR001891 GO:0004470|GO:0004471
Rops5g00107 626 PIRSF ME 136 626 IPR001891 GO:0004470|GO:0004471
Rops5g00107 626 Pfam Malic enzyme, NAD binding domain 342 594 IPR012302 GO:0051287
Rops5g00107 626 Gene3D - 50 339 IPR037062 GO:0004471
Rops5g00107 626 ProSitePatterns Malic enzymes signature. 338 354 IPR015884 GO:0004471
Rops5g00107 626 Gene3D - 340 626 - -
Rops5g00107 626 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 37 118 IPR046346 -
Rops5g00107 626 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 342 625 IPR036291 -
Rops5g00107 626 SMART malic_2 151 332 IPR012301 GO:0004471
Rops5g00107 626 CDD NAD_bind_1_malic_enz 342 620 - -
Rops5g00107 626 Pfam Malic enzyme, N-terminal domain 151 331 IPR012301 GO:0004471
Rops5g00107 626 FunFam NADP-dependent malic enzyme 1 149 336 - -
Rops5g00107 626 PRINTS Malic enzyme signature 253 275 IPR001891 GO:0004470|GO:0004471
Rops5g00107 626 PRINTS Malic enzyme signature 369 385 IPR001891 GO:0004470|GO:0004471
Rops5g00107 626 PRINTS Malic enzyme signature 338 354 IPR001891 GO:0004470|GO:0004471
Rops5g00107 626 PRINTS Malic enzyme signature 472 488 IPR001891 GO:0004470|GO:0004471
Rops5g00107 626 PRINTS Malic enzyme signature 313 331 IPR001891 GO:0004470|GO:0004471
Rops5g00107 626 PRINTS Malic enzyme signature 157 181 IPR001891 GO:0004470|GO:0004471
Rops5g00107 626 PRINTS Malic enzyme signature 217 246 IPR001891 GO:0004470|GO:0004471
Rops5g00107 626 FunFam Malic enzyme 340 626 - -
Rops5g00107 626 PANTHER MALIC ENZYME-RELATED 20 625 - -
Rops5g00107 626 SMART Malic_M_2 342 595 IPR012302 GO:0051287
Rops5g00107 626 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 141 341 IPR046346 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00107 Rops-Chr5 1848165 1853239 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00326 2 4901488 4906262 Rops5g00107 5 1848165 1853239 PCT