Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops5g00092 | ATGTCAGAAAATCAATTCTCTGGCAAAATTCCTTCCATACTTCCCAAACTCACCAATCTCAATCTATCCTCCAATCACTTGACAGGGAAAATTCCAAGTGAATTTGAAAATTCCGCATTTTCCAGCAGCTTGTTGAACAATCCTGGCCTCTGTGCTGATACCCCAGGGCTGAACCTTACTTCTTGCAATTCCAACTTTGAAAGGCCATCCAAAGGCTCATCTTGGTCTCTTACTTTGATTATTTGCCTTGTGGTATTAGCCTTCTTGCTAGCTTTGTCAATATCACTGTTGATTATCAAACTTTATAGAAAAAGAAAGCAAGGATTGGACACCTCATGGAAGCTTATTTCCTTTCAAAGGCTGAGTTTCACAGAATCAAACATATTGTCCTCAATGACTGAACATAATATCATTGGCAGTGGTGGATTTGGTACAGTATACCGTGTTCCTGTTGATGGTTTAGGCCATGTTGCTGTGAAAAAGATCTCAAATAACAGAAAGGTAAACAAAAAGCTTGAGAGCTCATTTCATGCAGAAGTTAAAATATTGAGCAATATTCATCATAACAACATTGTGAAGTTGTTGTGTTGTATCTCTAATGAGGATTCTATGCTCCTTGTGTACGAGTATCTTGAAAACCGTAGCCTAGATAGGTGGCTGCACAACAAGAACCAGTCATCTCATGTTGTCCTTGACTGGCCAAAAAGATTGCAAATAGCCATATGGGTTGCCCATGGTTTGTGCTACATGCACCATGATTGCTCACCACCAATTGTTCATCGACAAATAAAAACCAGTAACATCCTTTTGGATTCTCAATTCCATACAAAAGTTGCTGATTTTGGTCTTGCTAGGATGTTAATGAAGCCTGGGGAATCCAACACCATGTCAGCTGTGATTGGCTCAGTTGGCTACATGGCTCCAGAGTATGTTCAAACCACTAGAGTCAGTGAAAAGATTGATGTGTTTTGCTTTGGGGTGATCCTATTGGAACTGACAACTGGTAAAAAAGCTAATTATGGTGATGAGCACTCTTCTCTTGCAGAGTGGGCTTGGCGCCACATGAATGTAGGAAGCAATATAGAAGAGCTGCTAGATAGTGATTTCATGGAACCAAATCACTTGGATGAAATGCGCAGTGTTTTCAAACTTGGGTTTATGTGTACTGCAACACTTCCTTCTAGTAGACCTTCCATGAAGCAGGTACTGCACTTATTGCTCCGATGTGGAGAAGGATTCACATTTGGAGAGAGGAATGTTGGTTTCTATGATGCTGTTCCACTTCTTAAGAATTCAAAATGGGAGAAATCACGCAAAGAAGTAACAACTTCGCTGGCACAAAATGAGAAGATTTCAAAGACTAATGGTGTCAAACTTGAGGAGCCTTATGCATATAGAAGCTTGGTAAGCAGCTTACTGTACCTGATAACAACTAGACCTGACTTGATGTTTCCAGCTAGTTTGCTTCCAAGGTTCATGAGTTCACCTAGCAATGTTCACATGGGAATTGCCAAGAGTGTGCCGAAGTATGTTAGAGGTGCAACAAATCTTGCAATTTGGTATTTAAAGACAGGAGGAGTTAAGCAATTTGGCTATGCTGACAGTGATTGGGCAGGAAGTGATGATGACATGGAAAACACTTCAAGTTATGTATTTACAATTAGTTCAGGTGTTATTTACTGGAATGTAAAAATACAAGAAGTAATGACACAATCAACTGTAGAAGCAGAGTATGACTCCCTAACAGCAATTGCTGCAAATGAAGAAATACGGTTAAGAAAATTGCTTGTTGATTTAGGCCAAAAACAAAGCTCACCAATTGATGTGCAACTTGTTGACATAATGACTGAAGTACTTCCTTAA | 1863 | 0.3967 | MSENQFSGKIPSILPKLTNLNLSSNHLTGKIPSEFENSAFSSSLLNNPGLCADTPGLNLTSCNSNFERPSKGSSWSLTLIICLVVLAFLLALSISLLIIKLYRKRKQGLDTSWKLISFQRLSFTESNILSSMTEHNIIGSGGFGTVYRVPVDGLGHVAVKKISNNRKVNKKLESSFHAEVKILSNIHHNNIVKLLCCISNEDSMLLVYEYLENRSLDRWLHNKNQSSHVVLDWPKRLQIAIWVAHGLCYMHHDCSPPIVHRQIKTSNILLDSQFHTKVADFGLARMLMKPGESNTMSAVIGSVGYMAPEYVQTTRVSEKIDVFCFGVILLELTTGKKANYGDEHSSLAEWAWRHMNVGSNIEELLDSDFMEPNHLDEMRSVFKLGFMCTATLPSSRPSMKQVLHLLLRCGEGFTFGERNVGFYDAVPLLKNSKWEKSRKEVTTSLAQNEKISKTNGVKLEEPYAYRSLVSSLLYLITTRPDLMFPASLLPRFMSSPSNVHMGIAKSVPKYVRGATNLAIWYLKTGGVKQFGYADSDWAGSDDDMENTSSYVFTISSGVIYWNVKIQEVMTQSTVEAEYDSLTAIAANEEIRLRKLLVDLGQKQSSPIDVQLVDIMTEVLP* | 621 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops5g00092 | 620 | Pfam | Protein kinase domain | 134 | 404 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops5g00092 | 620 | ProSiteProfiles | Protein kinase domain profile. | 132 | 407 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops5g00092 | 620 | FunFam | Kinase family with leucine-rich repeat domain-containing protein | 114 | 210 | - | - | |
Rops5g00092 | 620 | Gene3D | Transferase(Phosphotransferase) domain 1 | 211 | 413 | - | - | |
Rops5g00092 | 620 | Gene3D | Ribonuclease Inhibitor | 1 | 69 | IPR032675 | - | |
Rops5g00092 | 620 | ProSitePatterns | Protein kinases ATP-binding region signature. | 138 | 161 | IPR017441 | GO:0005524 | |
Rops5g00092 | 620 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 | 2 | 406 | - | - | |
Rops5g00092 | 620 | Gene3D | Phosphorylase Kinase; domain 1 | 109 | 210 | - | - | |
Rops5g00092 | 620 | SUPERFAMILY | Protein kinase-like (PK-like) | 124 | 406 | IPR011009 | - | |
Rops5g00092 | 620 | CDD | RNase_HI_RT_Ty1 | 531 | 607 | - | - | |
Rops5g00092 | 620 | FunFam | Kinase family with leucine-rich repeat domain-containing protein | 211 | 420 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops5g00092 | Rops-Chr5 | 1521057 | 1529065 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops5g00092 | 2 | 410 | Receptor kinase-like Gene Family | AT5G25930 | 53.222 | 7.78e-145 | 443 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Rops5g00092 | Pkinase | 4.3e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops5g00092 | - | - | gmx:100819744 | 669.848 |