Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00092 ATGTCAGAAAATCAATTCTCTGGCAAAATTCCTTCCATACTTCCCAAACTCACCAATCTCAATCTATCCTCCAATCACTTGACAGGGAAAATTCCAAGTGAATTTGAAAATTCCGCATTTTCCAGCAGCTTGTTGAACAATCCTGGCCTCTGTGCTGATACCCCAGGGCTGAACCTTACTTCTTGCAATTCCAACTTTGAAAGGCCATCCAAAGGCTCATCTTGGTCTCTTACTTTGATTATTTGCCTTGTGGTATTAGCCTTCTTGCTAGCTTTGTCAATATCACTGTTGATTATCAAACTTTATAGAAAAAGAAAGCAAGGATTGGACACCTCATGGAAGCTTATTTCCTTTCAAAGGCTGAGTTTCACAGAATCAAACATATTGTCCTCAATGACTGAACATAATATCATTGGCAGTGGTGGATTTGGTACAGTATACCGTGTTCCTGTTGATGGTTTAGGCCATGTTGCTGTGAAAAAGATCTCAAATAACAGAAAGGTAAACAAAAAGCTTGAGAGCTCATTTCATGCAGAAGTTAAAATATTGAGCAATATTCATCATAACAACATTGTGAAGTTGTTGTGTTGTATCTCTAATGAGGATTCTATGCTCCTTGTGTACGAGTATCTTGAAAACCGTAGCCTAGATAGGTGGCTGCACAACAAGAACCAGTCATCTCATGTTGTCCTTGACTGGCCAAAAAGATTGCAAATAGCCATATGGGTTGCCCATGGTTTGTGCTACATGCACCATGATTGCTCACCACCAATTGTTCATCGACAAATAAAAACCAGTAACATCCTTTTGGATTCTCAATTCCATACAAAAGTTGCTGATTTTGGTCTTGCTAGGATGTTAATGAAGCCTGGGGAATCCAACACCATGTCAGCTGTGATTGGCTCAGTTGGCTACATGGCTCCAGAGTATGTTCAAACCACTAGAGTCAGTGAAAAGATTGATGTGTTTTGCTTTGGGGTGATCCTATTGGAACTGACAACTGGTAAAAAAGCTAATTATGGTGATGAGCACTCTTCTCTTGCAGAGTGGGCTTGGCGCCACATGAATGTAGGAAGCAATATAGAAGAGCTGCTAGATAGTGATTTCATGGAACCAAATCACTTGGATGAAATGCGCAGTGTTTTCAAACTTGGGTTTATGTGTACTGCAACACTTCCTTCTAGTAGACCTTCCATGAAGCAGGTACTGCACTTATTGCTCCGATGTGGAGAAGGATTCACATTTGGAGAGAGGAATGTTGGTTTCTATGATGCTGTTCCACTTCTTAAGAATTCAAAATGGGAGAAATCACGCAAAGAAGTAACAACTTCGCTGGCACAAAATGAGAAGATTTCAAAGACTAATGGTGTCAAACTTGAGGAGCCTTATGCATATAGAAGCTTGGTAAGCAGCTTACTGTACCTGATAACAACTAGACCTGACTTGATGTTTCCAGCTAGTTTGCTTCCAAGGTTCATGAGTTCACCTAGCAATGTTCACATGGGAATTGCCAAGAGTGTGCCGAAGTATGTTAGAGGTGCAACAAATCTTGCAATTTGGTATTTAAAGACAGGAGGAGTTAAGCAATTTGGCTATGCTGACAGTGATTGGGCAGGAAGTGATGATGACATGGAAAACACTTCAAGTTATGTATTTACAATTAGTTCAGGTGTTATTTACTGGAATGTAAAAATACAAGAAGTAATGACACAATCAACTGTAGAAGCAGAGTATGACTCCCTAACAGCAATTGCTGCAAATGAAGAAATACGGTTAAGAAAATTGCTTGTTGATTTAGGCCAAAAACAAAGCTCACCAATTGATGTGCAACTTGTTGACATAATGACTGAAGTACTTCCTTAA 1863 0.3967 MSENQFSGKIPSILPKLTNLNLSSNHLTGKIPSEFENSAFSSSLLNNPGLCADTPGLNLTSCNSNFERPSKGSSWSLTLIICLVVLAFLLALSISLLIIKLYRKRKQGLDTSWKLISFQRLSFTESNILSSMTEHNIIGSGGFGTVYRVPVDGLGHVAVKKISNNRKVNKKLESSFHAEVKILSNIHHNNIVKLLCCISNEDSMLLVYEYLENRSLDRWLHNKNQSSHVVLDWPKRLQIAIWVAHGLCYMHHDCSPPIVHRQIKTSNILLDSQFHTKVADFGLARMLMKPGESNTMSAVIGSVGYMAPEYVQTTRVSEKIDVFCFGVILLELTTGKKANYGDEHSSLAEWAWRHMNVGSNIEELLDSDFMEPNHLDEMRSVFKLGFMCTATLPSSRPSMKQVLHLLLRCGEGFTFGERNVGFYDAVPLLKNSKWEKSRKEVTTSLAQNEKISKTNGVKLEEPYAYRSLVSSLLYLITTRPDLMFPASLLPRFMSSPSNVHMGIAKSVPKYVRGATNLAIWYLKTGGVKQFGYADSDWAGSDDDMENTSSYVFTISSGVIYWNVKIQEVMTQSTVEAEYDSLTAIAANEEIRLRKLLVDLGQKQSSPIDVQLVDIMTEVLP* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00092 620 Pfam Protein kinase domain 134 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00092 620 ProSiteProfiles Protein kinase domain profile. 132 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00092 620 FunFam Kinase family with leucine-rich repeat domain-containing protein 114 210 - -
Rops5g00092 620 Gene3D Transferase(Phosphotransferase) domain 1 211 413 - -
Rops5g00092 620 Gene3D Ribonuclease Inhibitor 1 69 IPR032675 -
Rops5g00092 620 ProSitePatterns Protein kinases ATP-binding region signature. 138 161 IPR017441 GO:0005524
Rops5g00092 620 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 2 406 - -
Rops5g00092 620 Gene3D Phosphorylase Kinase; domain 1 109 210 - -
Rops5g00092 620 SUPERFAMILY Protein kinase-like (PK-like) 124 406 IPR011009 -
Rops5g00092 620 CDD RNase_HI_RT_Ty1 531 607 - -
Rops5g00092 620 FunFam Kinase family with leucine-rich repeat domain-containing protein 211 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00092 Rops-Chr5 1521057 1529065 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00092 2 410 Receptor kinase-like Gene Family AT5G25930 53.222 7.78e-145 443
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Rops5g00092 Pkinase 4.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00092 - - gmx:100819744 669.848