Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00091 ATGCTGAACCATGCAGACTCTGTGTCTCAGCTGCATGATCAAGAACATGAAGTCCTAATGAAGATAAAGCTGCACCTACAAAACCCACCATTCCTCAGTCACTGGACCCCATCAAACTCTTCACATTGCTCTTGGCCAGAGATAACATGCACCAATGGTTATGTCACTGGATTGACTTTGGTCAACTCCACCATCACTCAAACTATACCACCTTTCATATGTGACCTCAAAAATCTCACACATGTTGATTTCCACCAGAATTTCATTCCTGGGGAGTTCCCAACATATCTCTTCAAGTGTTCCAAGTTGGAGTACCTTGACCTTTCAATGAACAACTTTGATGGTAAGATTCCAGATGACATTGATAGCTTGGTTAACTTGAGGCATCTTAACCTTGGTTCCACAAACTTCAATGGTGACATTCCTAAGAGTATCGGAAGCTTGAAGGAATTGAGGCTACTTCAACTTCAATATTGTTTATTTAATGGTACTTTCCCTGATGAGGTTGGCAATTTGCTCAATCTTGAATTCTTGGATGTGTCCTCTAACTTTGAGTTCCATCCTTGGAAGATCCCATCAAGTTTAACCAAGTTGAAGAAATTGAACTTCTTGCATATGTATGGTTCAAACTTGATAGGTGAAATCCCTGAAGACATTCGAGAAATGGTGGAATTGGAGAACTTGGATATATCACAAAACAATTTAACTGGGCACATTCCTAATGATTTGTTCATGCTGAAGAATTTGAGCATACTGTACCTTTATAAAAACAAACTTTCTGGGGAGATACCAAGTGAGGTTGAAGCATTAAATTTGACCGAGATAGATCTTGCAGGGAACAATCTAATAGGGAAAATACCAGATGATTTTGGAAAGCTTCAAAACTTAACATGGTTGAGTTTGTCTATGAATAACTTGTCAGGGGAGATACCAAAAAGCATTGGTCTTCTTCCATCTCTGATAGATTTTCGTGTCTTTATGAACAATTTGTCAGGTACTCTTCCACCTGACTTTGGCCGCTACTCAAAGCTTGAAACCTTTCATATTGCATCAAACAGTCTAAGGGGAAAGCTACCACATAACTTATGTTACCATGGTGAGTTGCTTAATTTAACTGTTTATGAAAATTATCTGAATGGGGAGTTGCCAGAATCACTTGGAAGTTGCAGCACCCTGCTGGATCTTAAAATTTACAGCAATGAGTTTTCTGGCAATATTCCTAGTGGTCTTTGGACTTCCTCCAATTTGGTGAATTTCATGGTAAGCCATAATAAGTTCACTGGTGAGCTTCCTCAAAGATTGTCTTCTAATATTTCACTCTTTCAGATAAGTTACAATCAGTTTTATGGTAGAATTCCTGCTGGAATATCTTCCTGGACCAATGTGGTAGTGTTTGATGCCAGTAAGAACCACTTCAATGGAAGTTTTCCACAAGGGCTAACGGCTCTTCCAAAGCTAACAAAACTGTTGCTCGATCAGAACCAGCTCACAGGGCCACTTCCATCAGATATAATATCATGGAAGTCCCTAGTGATTCTAAATTTGAGCCAAAACCAACTTTCTGAACAAATCCCAGATGCAATTGGTCAGTTACCTGTCCTTAGTGTGCTTGACCTGTCAGAAAATCAATTCTCTGGCAAAATTCCTTACATACGTCCCAGACTCACCAATCTCAATCTATCCTCCAATCACTTGACAGGGAAAATTCCAAGTGAATTTGAAAATTCTGCGTTTTCCACCAGCTTTCTGGACAATCCTGGCCTCTGTGCTGATACCCCAGGACTGAACCTTACTTCTTGCAATTTTAGCTTAGAAAGGCCATCCAAAGGCTCATCTTGGTCTCTTACTTTGATTATTTGCCTTGTGGTATTAGCCTTCTTGCTGGCTTTGTCAATATCACTCTTGATTATCAAACTTTATAGTAAAAAAAAGCAAGGATTGGACACCTCATGGAAGCTTATTTCCTTTCAAAGGTTGAGTTTCACAGAATCAAACATATTGTACTCAATGACTGAGCATAATATCATTGGCAGTGGTGGATTTGGTACAGTATACCGTGTTCCTGTTGATGGTTTAGGCCATGTTGCTGTGAAAAAGATCTCAAATAACAGAAAGTTAAGCCAAAAGCTTGAGAGCTCATTTCGTGCAGAAGTTAAAATATTGAGCAATATTCGTCATAACAACATTGTGAAATTGTTGTGCTGTATCTCTAATGAGGATTCAATGCTCCTTGTGTATGAGTATCTTGAAAACCGTAGCCTAGATAGGTGGCTGCACAACGAGAACAAGTCATCTCATATTGTCCTTGATTGGCCAAAGAGATTGCAAATAGCCATTGGGGTTGCTCATGGTTTGTGCTACATGCACCATGATTGCTCACCACCAATTGTTCATAGAGATATAAAAACAAGTAACATCCTCTTGGATGCTCAATTCAGTGCAAAAGTTGCTGATTTTGGTCTTGCTAGGATGTTAATGAAGCCTGGGCAATCCAACACCATGTCAGCTGTGATTGGCTCATTTGGCTATATGGCTCCAGAATATGTTCAAACAACTAGAGTCACTGAAAAGATTGATGTGTTTAGCTTTGGGGTGATCCTATTGGAACTGACAACTGGTAAAGAAGCTAATTATGGTGATGAGCACTCATCTCTTGCAGATTGGGCTCGGCGCCACATGAATGTGAGAAGCAATATAAAAGAGCTGCTAGATAGTGATTTCATGGAACCAAATCACTTGGATGAAATGATCAGTGTTTTCAAACTTGGGATCATGTGTACTGCAACACTTCCTTCTAGTAGACCTTCCATGAAGGAGGTACTGCACTCATTGCTCCGATGTGGAGAAGGATTCACATTTGGAGAGAGGAATGTTGGTTTCTATGATGCTGTTCCACTTCTTAAGAATTCAAAATTGGAGAGTAAGTTGGATGTTGTTGATAATGATAGTGACTAA 2955 0.3963 MLNHADSVSQLHDQEHEVLMKIKLHLQNPPFLSHWTPSNSSHCSWPEITCTNGYVTGLTLVNSTITQTIPPFICDLKNLTHVDFHQNFIPGEFPTYLFKCSKLEYLDLSMNNFDGKIPDDIDSLVNLRHLNLGSTNFNGDIPKSIGSLKELRLLQLQYCLFNGTFPDEVGNLLNLEFLDVSSNFEFHPWKIPSSLTKLKKLNFLHMYGSNLIGEIPEDIREMVELENLDISQNNLTGHIPNDLFMLKNLSILYLYKNKLSGEIPSEVEALNLTEIDLAGNNLIGKIPDDFGKLQNLTWLSLSMNNLSGEIPKSIGLLPSLIDFRVFMNNLSGTLPPDFGRYSKLETFHIASNSLRGKLPHNLCYHGELLNLTVYENYLNGELPESLGSCSTLLDLKIYSNEFSGNIPSGLWTSSNLVNFMVSHNKFTGELPQRLSSNISLFQISYNQFYGRIPAGISSWTNVVVFDASKNHFNGSFPQGLTALPKLTKLLLDQNQLTGPLPSDIISWKSLVILNLSQNQLSEQIPDAIGQLPVLSVLDLSENQFSGKIPYIRPRLTNLNLSSNHLTGKIPSEFENSAFSTSFLDNPGLCADTPGLNLTSCNFSLERPSKGSSWSLTLIICLVVLAFLLALSISLLIIKLYSKKKQGLDTSWKLISFQRLSFTESNILYSMTEHNIIGSGGFGTVYRVPVDGLGHVAVKKISNNRKLSQKLESSFRAEVKILSNIRHNNIVKLLCCISNEDSMLLVYEYLENRSLDRWLHNENKSSHIVLDWPKRLQIAIGVAHGLCYMHHDCSPPIVHRDIKTSNILLDAQFSAKVADFGLARMLMKPGQSNTMSAVIGSFGYMAPEYVQTTRVTEKIDVFSFGVILLELTTGKEANYGDEHSSLADWARRHMNVRSNIKELLDSDFMEPNHLDEMISVFKLGIMCTATLPSSRPSMKEVLHSLLRCGEGFTFGERNVGFYDAVPLLKNSKLESKLDVVDNDSD* 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00091 984 Pfam Leucine rich repeat N-terminal domain 13 50 IPR013210 -
Rops5g00091 984 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 168 268 - -
Rops5g00091 984 Gene3D Ribonuclease Inhibitor 326 603 IPR032675 -
Rops5g00091 984 FunFam Kinase family with leucine-rich repeat domain-containing protein 652 748 - -
Rops5g00091 984 FunFam Receptor-like protein kinase HSL1 isoform A 12 163 - -
Rops5g00091 984 SUPERFAMILY RNI-like 274 621 - -
Rops5g00091 984 Gene3D Transferase(Phosphotransferase) domain 1 749 952 - -
Rops5g00091 984 SUPERFAMILY L domain-like 26 355 - -
Rops5g00091 984 ProSitePatterns Serine/Threonine protein kinases active-site signature. 796 808 IPR008271 GO:0004672|GO:0006468
Rops5g00091 984 Gene3D Ribonuclease Inhibitor 12 187 IPR032675 -
Rops5g00091 984 Gene3D Ribonuclease Inhibitor 188 325 IPR032675 -
Rops5g00091 984 ProSitePatterns Protein kinases ATP-binding region signature. 676 699 IPR017441 GO:0005524
Rops5g00091 984 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 269 939 - -
Rops5g00091 984 ProSiteProfiles Protein kinase domain profile. 670 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00091 984 SMART LRR_typ_2 222 246 IPR003591 -
Rops5g00091 984 SMART LRR_typ_2 293 317 IPR003591 -
Rops5g00091 984 SMART LRR_typ_2 76 100 IPR003591 -
Rops5g00091 984 SMART LRR_typ_2 124 148 IPR003591 -
Rops5g00091 984 SMART LRR_typ_2 508 531 IPR003591 -
Rops5g00091 984 SMART LRR_typ_2 483 507 IPR003591 -
Rops5g00091 984 Pfam Protein kinase domain 672 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00091 984 FunFam Receptor-like protein kinase HSL1 isoform A 276 600 - -
Rops5g00091 984 Gene3D Phosphorylase Kinase; domain 1 647 748 - -
Rops5g00091 984 SUPERFAMILY Protein kinase-like (PK-like) 668 944 IPR011009 -
Rops5g00091 984 SMART serkin_6 670 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00091 984 Pfam Leucine Rich Repeat 271 293 IPR001611 GO:0005515
Rops5g00091 984 Pfam Leucine Rich Repeat 102 124 IPR001611 GO:0005515
Rops5g00091 984 Pfam Leucine Rich Repeat 554 575 IPR001611 GO:0005515
Rops5g00091 984 FunFam Kinase family with leucine-rich repeat domain-containing protein 749 958 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00091 Rops-Chr5 1442658 1462739 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00091 9 948 Receptor kinase-like Gene Family AT5G25930 51.261 0.0 927
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Rops5g00091 Pkinase 1.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00091 - - gmx:100819744 1476.84