Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00090 ATGACAATATTAGCCAAATCCTGTGTTAAATTAGTATTTTACTCTCTTGTGACCTCCTTTCTCATCCTGAGCCATGCAGATTTAGAGTCTCAGCTCCATGATCAAGAACATGAAGTCCTAATGAAGATAAAGCTGCACCTAAAAAACCCGCCATTCCTCAGTCACTGGACCCCATCAAACTCTTCACATTGCTCTTGGCCAGAGATCACATGCACCAATGGTTATGTTACTGGATTGACTCTGGTCAACACCAGCATCACTCAAACTATACCACCTTTCATATGTGACCTCAAAAATCTCACACATGTCGATTTCCACCAGAATTTCATTCCTGGGGAGTTCCCAACACATCTCTACAAGTGTTCCAAGTTGGAGTACCTTGACCTTTCAATGAACAACTTTGTTGGTAACATTCCTGATGACATTGATAGCTTGGTTAACTTGAGGTATCTTTACCTTGGTTCCACAAACTTCAGTGGTGATATTCCTAAGAGTATTGGAAGCTTGAAGGAATTGAGGTTACTTCAACTTCAATATTGTCTATATAACGGTACTTTCCCTGGTGAGGTTGGCGACTTGTTCCATCTTGAATTCTTGGATGTGTCCTCAAACTATATGTTCCCTCCTTGGACGATCCCATCAAGTTTAACCAAGTTGAAGAAATTGAACCTCTTGTATATGTATGGTTCAAACTTGATAGGTGAAATCCCTGAATCCATTGGAGAAATGGTGGCATTGGAGAACTTGGATATATCACAAAACAATTTAACTGGGCACATTCCAAATGATTTGTTCATGCTGAAGAATTTGAGCATACTGTACCTTTATAAAAACAAACTTTCTGGGGAGATACCAAGTGTAGTTGAAGCATTAAATTTGACCCAGATAGATCTTGCAGAGAACAATCTTGTAGGGAAAATACCAGATGATTTTGGAAAGCTCCAAAACTTAACATGGTTGAGTTTGTCTATGAATAACTTGTCAGGGGAGATACCAAAAAGCATTGGTCTTCTTCCATCTCTGATACATTTTCGTGTCTTTATGAACAATTTGTCAGGTACTCTTCCACCTGACTTTGGCCGCTACTCAAAGCTTGAAACCTTTCATATTGCATCTAACAGTTATAAGGGAAGGCTACCAGAGAACTTATGTTATCACGGTGAGTTGCAAAATTTAACTTCTTATGAAAATTATCTGACTGGGGAGTTGCCAAAATCACTTGGAAGTTGCAGCACCCTGCTGGATCTTAAAATTTACAGTAATGAGTTTTCTGGCAATATTCCTAGTAGTCTTTGGACTTCCTCCAATTTGGTGAATTTCATGGTAAGCCATAATAAGTTCACTGGTGAGCTTCCTGAAATATTGTCTTCTAGTATTTCACTCTTTAATATAAGTTACAATCAGTTTTATGGTAGAATTCCTGCTGGAGTATCTTCCTGGACCAATGTGGTAGTGTTTGATGCCAGTAAGAACTACTTCAATGGAAGTTTTCCACAAGGGCTAACGGCTCTTCCAAAGCTAACAAAACTGTTGCTCGATCAGAACCAGCTCACAGGGCCACTTCCATCAGATATAATATCATGGAAGTCCCTAGAGATTCTAAATTTGAGCCAAAACCAACTTTCTGAACAAATCCCAGATGCAATTGGTCAGTTACCTGTCCTTAGTGTGCTTGACATGTCAGAAAATCAATTCTCTGGCAAAATTCCTTCCATACTTCCCAAACTCACCAATCTCAATCTATCCTCCAATCACTTGACAGGGAAAATTCCAAGTGAATTTGAAAATTCTGTGTTTTCCACCAGCTTTTTGGACAATACTGGCCTCTGTGCTGATACCCCTGCACTGAACCTTACTTCTTGCAATTCTAGCTTAGAAAGGCCATCCAAAGGCTCATCTTGGTCTCTTACTTTGATTATTTGCCTTGTGGTATTAGCCTTCTTGCTGGCTTTGTCAATATCACTCTTGATTATCAAACTTTATAGTAAAAGAAAGCAAGGATTGGACACCTCATGGAAGCTTATTTCCTTTCAAAGGTTGAGTTTCACAGAATCAAACATATTGTCCTCAATGACTGAACATAATATCATTGGCAGTGGAGGATTTGGAACAGTATACCGTGTTCCTGTTGATGGTTTAGGCCATGTTGCTGTGAAAAAGATCTCAAATAACAGAAAGTTAAGCCAAAAGCTTGAGAGCTCATTTCGTGCAGAAGTTAAAATATTGAGCAATATTCATCATAACAACATTGTGAAGTTGTTGTGTTGTATCTGTAATGAGGATTCTATGCTCCTTGTGTACGAGTATCTTGAAAACCGTAGCCTAGATAGGTGGCTGCACAATAGGAAGAAGTCATCTCTTGTTGTCCTTGACTGGCCAAAAAAATTGCAAATAGCCATTGGGGTTGCACATGGTTTGTGCTACATGCACCATGATTGCTCACCACCAATTGTTCATCGACATATAAAAACCAGTAACATCCTTTTGGATTCTCAATTCAATGCAAAAGTTGCTGATTTTGGTCTTGCTAGGATGTTAATGAAGCATGGGCAATCCAACACCATGTCAGCTGTGATTGGCTCATTTGGCTACATGGCTCCAGAGTATGTTCAAACAACTAGAGTCAGTGAAAAGGTTGATGTGTTTAGCTTTGGGGTTATCCTATTGGAACTGACAACTGGTAAAGAAGCTAATTATGGTGATGAGTACTCATCTCTTGCAGAGTGGGCTTGGCGCCACATGAATGTAGGAAGCAATATAGAAGAGCTGCTACATAGTGATTTCATGGAACCAAATTACTTGGATGAAATGATCAATGTTTTCAAACTTGGGATCATGTGTACGGCAACACTTCCTTCTAGTAGACCTTCCATGAAGGAGGTACTGCACTCATTGCTCCGATGTGGAGAAGGATTCACATTTGGAGAGAGGAATGTTGGTTTCTATGATGCTGTTCCACTTCTTAAGAATTCAAAATGGGAGAGTAAGTTGGATGTTGTTGATAATGATAGTGACTAA 3018 0.3943 MTILAKSCVKLVFYSLVTSFLILSHADLESQLHDQEHEVLMKIKLHLKNPPFLSHWTPSNSSHCSWPEITCTNGYVTGLTLVNTSITQTIPPFICDLKNLTHVDFHQNFIPGEFPTHLYKCSKLEYLDLSMNNFVGNIPDDIDSLVNLRYLYLGSTNFSGDIPKSIGSLKELRLLQLQYCLYNGTFPGEVGDLFHLEFLDVSSNYMFPPWTIPSSLTKLKKLNLLYMYGSNLIGEIPESIGEMVALENLDISQNNLTGHIPNDLFMLKNLSILYLYKNKLSGEIPSVVEALNLTQIDLAENNLVGKIPDDFGKLQNLTWLSLSMNNLSGEIPKSIGLLPSLIHFRVFMNNLSGTLPPDFGRYSKLETFHIASNSYKGRLPENLCYHGELQNLTSYENYLTGELPKSLGSCSTLLDLKIYSNEFSGNIPSSLWTSSNLVNFMVSHNKFTGELPEILSSSISLFNISYNQFYGRIPAGVSSWTNVVVFDASKNYFNGSFPQGLTALPKLTKLLLDQNQLTGPLPSDIISWKSLEILNLSQNQLSEQIPDAIGQLPVLSVLDMSENQFSGKIPSILPKLTNLNLSSNHLTGKIPSEFENSVFSTSFLDNTGLCADTPALNLTSCNSSLERPSKGSSWSLTLIICLVVLAFLLALSISLLIIKLYSKRKQGLDTSWKLISFQRLSFTESNILSSMTEHNIIGSGGFGTVYRVPVDGLGHVAVKKISNNRKLSQKLESSFRAEVKILSNIHHNNIVKLLCCICNEDSMLLVYEYLENRSLDRWLHNRKKSSLVVLDWPKKLQIAIGVAHGLCYMHHDCSPPIVHRHIKTSNILLDSQFNAKVADFGLARMLMKHGQSNTMSAVIGSFGYMAPEYVQTTRVSEKVDVFSFGVILLELTTGKEANYGDEYSSLAEWAWRHMNVGSNIEELLHSDFMEPNYLDEMINVFKLGIMCTATLPSSRPSMKEVLHSLLRCGEGFTFGERNVGFYDAVPLLKNSKWESKLDVVDNDSD* 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00090 1005 Gene3D Phosphorylase Kinase; domain 1 668 769 - -
Rops5g00090 1005 FunFam Kinase family with leucine-rich repeat domain-containing protein 770 979 - -
Rops5g00090 1005 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 18 960 - -
Rops5g00090 1005 Pfam Protein kinase domain 693 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00090 1005 FunFam Receptor-like protein kinase HSL1 isoform A 297 621 - -
Rops5g00090 1005 FunFam Kinase family with leucine-rich repeat domain-containing protein 673 769 - -
Rops5g00090 1005 CDD STKc_IRAK 697 967 - -
Rops5g00090 1005 SUPERFAMILY L domain-like 47 373 - -
Rops5g00090 1005 Gene3D Ribonuclease Inhibitor 211 344 IPR032675 -
Rops5g00090 1005 Pfam Leucine Rich Repeat 575 596 IPR001611 GO:0005515
Rops5g00090 1005 SUPERFAMILY RNI-like 296 598 - -
Rops5g00090 1005 FunFam Receptor-like protein kinase HSL1 isoform A 33 184 - -
Rops5g00090 1005 Gene3D Ribonuclease Inhibitor 25 83 IPR032675 -
Rops5g00090 1005 Gene3D Ribonuclease Inhibitor 84 210 IPR032675 -
Rops5g00090 1005 Gene3D Ribonuclease Inhibitor 345 624 IPR032675 -
Rops5g00090 1005 Gene3D Transferase(Phosphotransferase) domain 1 770 973 - -
Rops5g00090 1005 ProSiteProfiles Protein kinase domain profile. 691 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00090 1005 SMART LRR_typ_2 314 338 IPR003591 -
Rops5g00090 1005 SMART LRR_typ_2 573 596 IPR003591 -
Rops5g00090 1005 SMART LRR_typ_2 529 552 IPR003591 -
Rops5g00090 1005 SMART LRR_typ_2 243 267 IPR003591 -
Rops5g00090 1005 SMART LRR_typ_2 504 528 IPR003591 -
Rops5g00090 1005 SMART LRR_typ_2 145 169 IPR003591 -
Rops5g00090 1005 Pfam Leucine rich repeat N-terminal domain 34 71 IPR013210 -
Rops5g00090 1005 ProSiteProfiles Leucine-rich repeat profile. 530 552 IPR001611 GO:0005515
Rops5g00090 1005 ProSitePatterns Protein kinases ATP-binding region signature. 697 720 IPR017441 GO:0005524
Rops5g00090 1005 SUPERFAMILY Protein kinase-like (PK-like) 683 965 IPR011009 -
Rops5g00090 1005 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 189 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00090 Rops-Chr5 1439685 1443148 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00090 30 969 Receptor kinase-like Gene Family AT5G25930 51.261 0.0 930
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Rops5g00090 Pkinase 8.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00090 - - gmx:100819744 1479.92